Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   KHQ31_RS00370 Genome accession   NZ_CP074441
Coordinates   69924..71057 (+) Length   377 a.a.
NCBI ID   WP_213409067.1    Uniprot ID   -
Organism   Weissella ceti strain CECT 7719     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 64924..76057
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KHQ31_RS00355 (KHQ31_00355) yycH 66656..67972 (+) 1317 WP_213409065.1 two-component system activity regulator YycH -
  KHQ31_RS00360 (KHQ31_00360) yycI 68000..68806 (+) 807 WP_213409066.1 two-component system regulatory protein YycI -
  KHQ31_RS00365 (KHQ31_00365) - 68850..69626 (+) 777 WP_213409678.1 MBL fold metallo-hydrolase -
  KHQ31_RS00370 (KHQ31_00370) htrA 69924..71057 (+) 1134 WP_213409067.1 S1C family serine protease Regulator
  KHQ31_RS00375 (KHQ31_00375) - 71334..71762 (-) 429 WP_213409068.1 DUF1934 domain-containing protein -
  KHQ31_RS00380 (KHQ31_00380) - 71959..73332 (+) 1374 WP_213409069.1 HD domain-containing protein -
  KHQ31_RS00385 (KHQ31_00385) - 73362..74174 (+) 813 WP_213409070.1 Cof-type HAD-IIB family hydrolase -
  KHQ31_RS00390 (KHQ31_00390) rpoE 74273..74854 (+) 582 WP_322743213.1 DNA-directed RNA polymerase subunit delta -

Sequence


Protein


Download         Length: 377 a.a.        Molecular weight: 39282.41 Da        Isoelectric Point: 5.5111

>NTDB_id=564925 KHQ31_RS00370 WP_213409067.1 69924..71057(+) (htrA) [Weissella ceti strain CECT 7719]
MKKTMSTVVVAVLAGLVGGGSAVGIATYYGMGTTSPKVTQPNTKVADSAVKDDSQATKAFKNVSGAVVSVINLQGGRSGD
ELLETASEGSGVIYKSKGKDAYVVTNNHVVDGSRKIQILMQDGTKESATLVGTDVETDLAVLKISNSSVTKVAEFANSDQ
LQPGETALAIGSPLGSEYATSVTEGIISAPKREIESHTPDGQRLGKATVIQTDAAINPGNSGGALVNLAGQVVGINSMKL
AQSQSGTAVEGMGFAIPANTVVQIIEALEKDGKVTRPSLGISLFDISNIAAEDQQDILQLPKKVKSGVVIMKTERNGSAA
RAGLKKFDVITKLNDVDVADASDLRNALYQFNVGDTITVTYYRDGKEQTLQMKLQSN

Nucleotide


Download         Length: 1134 bp        

>NTDB_id=564925 KHQ31_RS00370 WP_213409067.1 69924..71057(+) (htrA) [Weissella ceti strain CECT 7719]
ATGAAAAAAACAATGAGTACAGTGGTTGTTGCTGTCTTGGCTGGTTTAGTTGGTGGTGGGAGTGCTGTTGGGATTGCGAC
GTACTATGGTATGGGCACGACATCACCAAAAGTAACGCAACCAAATACGAAGGTGGCGGATTCTGCAGTTAAGGATGACT
CACAAGCAACTAAGGCGTTTAAAAACGTCTCAGGAGCTGTTGTGTCGGTTATTAACTTGCAGGGTGGACGTTCGGGGGAT
GAGTTGTTAGAAACAGCGTCTGAAGGGTCAGGTGTTATTTATAAGAGTAAAGGTAAAGATGCCTATGTTGTGACCAATAA
TCACGTGGTAGATGGATCACGAAAGATTCAAATCTTGATGCAAGATGGGACTAAAGAATCTGCAACGTTAGTTGGGACTG
ATGTTGAAACTGATTTGGCAGTCTTAAAGATTTCTAATTCAAGTGTCACTAAGGTAGCTGAATTTGCTAATTCAGATCAA
CTGCAACCAGGTGAAACAGCTTTGGCGATTGGGTCACCTCTAGGTTCTGAATATGCAACCTCTGTCACAGAAGGAATTAT
TTCAGCGCCTAAGCGTGAAATTGAGAGTCATACACCGGATGGACAACGGTTAGGAAAGGCAACTGTTATTCAAACTGATG
CGGCCATTAACCCAGGTAATTCTGGCGGAGCTTTGGTTAATTTGGCGGGGCAAGTTGTTGGCATTAATTCAATGAAGTTG
GCACAATCTCAATCAGGAACTGCAGTAGAAGGGATGGGGTTTGCTATTCCGGCCAATACGGTGGTGCAGATTATTGAAGC
GCTTGAAAAGGATGGTAAAGTAACACGTCCTAGTCTAGGTATATCTCTGTTTGATATCAGTAACATTGCGGCTGAAGATC
AACAAGACATTTTGCAATTACCAAAGAAGGTTAAGTCGGGTGTTGTGATTATGAAGACCGAACGTAATGGTTCTGCTGCG
CGTGCCGGATTGAAGAAGTTTGACGTTATTACAAAGTTGAATGATGTTGATGTAGCAGACGCAAGTGACTTGCGAAATGC
ATTGTACCAATTCAATGTAGGTGACACGATTACGGTGACTTATTATCGTGATGGTAAGGAACAAACTTTGCAAATGAAAC
TACAGTCAAATTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mitis NCTC 12261

47.382

100

0.48

  htrA Streptococcus gordonii str. Challis substr. CH1

46.094

100

0.469

  htrA Streptococcus mutans UA159

49.57

92.573

0.459

  htrA Streptococcus pneumoniae TIGR4

49.853

89.92

0.448

  htrA Streptococcus pneumoniae R6

49.853

89.92

0.448

  htrA Streptococcus pneumoniae Rx1

49.853

89.92

0.448

  htrA Streptococcus pneumoniae D39

49.853

89.92

0.448