Detailed information NTG0056479

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: LILO_RS09075
• Genome accession: NC_020450
• Coordinates: 1906660..1908870 (-)
• Length: 736 a.a.
• NCBI ID: WP_015426938.1
• Uniprot ID: -
• Organism: Lactococcus lactis subsp. lactis IO-1
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1901660..1913870

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LILO_RS09045 (lilo_1747)	atpA	1901702..1903204 (-)	1503	WP_004255265.1	F0F1 ATP synthase subunit alpha	-
LILO_RS09050 (lilo_1748)	-	1903391..1903918 (-)	528	WP_015426935.1	F0F1 ATP synthase subunit delta	-
LILO_RS09055 (lilo_1749)	atpF	1903920..1904426 (-)	507	WP_010906128.1	F0F1 ATP synthase subunit B	-
LILO_RS09060 (lilo_1750)	atpB	1904441..1905154 (-)	714	WP_004255255.1	F0F1 ATP synthase subunit A	-
LILO_RS09065 (lilo_1751)	-	1905199..1905414 (-)	216	WP_004255250.1	F0F1 ATP synthase subunit C	-
LILO_RS09070 (lilo_1753)	-	1905599..1906375 (-)	777	WP_015426937.1	alpha/beta hydrolase	-
LILO_RS09075 (lilo_1754)	comEC	1906660..1908870 (-)	2211	WP_015426938.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
LILO_RS09080 (lilo_1755)	comEA	1908851..1909498 (-)	648	WP_015426939.1	ComEA family DNA-binding protein	Machinery gene
LILO_RS09085 (lilo_1756)	-	1909558..1910919 (-)	1362	WP_015426940.1	ABC transporter permease	-
LILO_RS09090 (lilo_1757)	-	1910916..1911848 (-)	933	WP_015426941.1	ABC transporter ATP-binding protein	-
LILO_RS09095 (lilo_1758)	-	1911953..1912351 (-)	399	WP_015426942.1	hypothetical protein	-
LILO_RS09100 (lilo_1759)	-	1912455..1913018 (-)	564	WP_004255233.1	GNAT family N-acetyltransferase	-

Sequence

Protein

• Length: 736 a.a.
• Molecular weight: 84627.33 Da
• Isoelectric Point: 9.6771

>NTDB_id=56479 LILO_RS09075 WP_015426938.1 1906660..1908870(-) (comEC) [Lactococcus lactis subsp. lactis IO-1]
MSCVLNKIPLIFLAYISVILYFLIFNFNLLCLILFIFSSLLALYRKYYLVIPLLLAMGSFFLVVKMDTIKNSENQPTTLS
KITMIPDTIQVNGDLLSFQGKERGQNYQVYETLKSKKEQKFYQNLSQNCQLSFTGNLQIPEKQRNFNGFDNQKYLASQNI
YRQITIDKINKIVLNDTFDLHVLRRKAIVWSQTHFPKPMNDYMTGLLFGFLSKDFNQMGDIYSSLGIIHLFALSGMQVNF
FIDWFRRIILRLGITREKLNIWQIPFSIFYAFMTGFSVSVLRALFQKNIRLNPLDNLAVTTFLMMIVSPKFLLTTGGQLT
LFYAFVISMISHKFSELKGIRKLLTESSVISLSVLPLLILDFHIFQPFSILLTIGFGFLFDVILLPLLLGTFLLSLIGYN
FNINHIFQILEWLIHEVDLPLHYPLVLGNPRPIELLILFFLIGLLIDNLFKKRRQIIFAGLIVCSFFICKNPIYPSITAV
DIGQGDSIFLQDKFNKETILIDTGGRLALPQERWQKPQSQTNAEKTLIPYLESVGVSQIDQLILTHTDADHVGDFLNLDD
KIKIKEIWVSPGELTNNHFVEKLKKANVTIHISKVGDKIPIFDSALQVLSNGYTGKGDNNDSIVTYGNFYHTKFLFTGDL
EQEGEKELLKNYPKLKVDVLKVGHHGSKTSSNPDFIKEINPKLALISVGKENRYGHPNQETLETLKKYQIKILRTDQRGA
LKLMQINQQWRIQTVR

Nucleotide

• Length: 2211 bp

>NTDB_id=56479 LILO_RS09075 WP_015426938.1 1906660..1908870(-) (comEC) [Lactococcus lactis subsp. lactis IO-1]
ATGAGTTGTGTTTTGAATAAAATTCCTTTGATATTTTTAGCTTATATTTCTGTTATCTTGTATTTTTTAATCTTCAATTT
TAATTTACTTTGTCTCATTTTGTTCATTTTTTCAAGTTTACTTGCCTTATATAGAAAATATTATTTAGTCATCCCACTTT
TATTAGCTATGGGAAGTTTTTTCTTAGTAGTAAAAATGGATACGATTAAGAATAGTGAAAATCAGCCAACCACTCTTTCC
AAAATTACAATGATCCCCGACACTATCCAAGTTAATGGTGATTTATTAAGCTTTCAAGGAAAAGAAAGAGGCCAAAATTA
TCAAGTTTACGAGACTCTAAAAAGTAAAAAAGAACAAAAATTTTATCAAAATCTAAGTCAAAATTGTCAGCTGAGTTTCA
CAGGAAACCTTCAAATTCCAGAAAAACAAAGAAATTTTAATGGATTCGATAATCAAAAGTATTTAGCGAGCCAGAATATT
TATCGGCAAATTACGATTGATAAAATTAATAAAATAGTTTTAAACGACACTTTTGACCTCCATGTTTTAAGACGAAAAGC
AATTGTCTGGTCACAAACTCATTTTCCAAAGCCAATGAATGATTATATGACTGGCTTACTTTTTGGGTTTTTAAGTAAAG
ATTTTAATCAAATGGGAGACATTTACAGTTCATTAGGAATTATTCATCTTTTTGCCTTATCGGGAATGCAAGTTAATTTT
TTCATTGATTGGTTTCGTAGAATTATTCTTCGACTAGGAATAACGAGAGAAAAATTAAATATTTGGCAAATTCCCTTTTC
AATTTTTTATGCATTTATGACAGGATTTTCGGTTTCAGTATTACGAGCTTTATTTCAAAAAAATATTCGTCTAAATCCTT
TAGATAACCTAGCAGTGACAACCTTTCTTATGATGATTGTCAGTCCTAAATTTTTACTGACAACAGGAGGACAACTAACT
TTATTTTATGCTTTTGTTATTTCAATGATTAGTCATAAATTTTCAGAACTAAAAGGAATAAGAAAATTACTGACAGAATC
ATCAGTGATTTCTTTGAGTGTTTTACCTTTACTCATTTTGGATTTTCATATCTTTCAACCTTTTTCAATTTTACTGACGA
TTGGCTTTGGCTTTTTATTTGATGTAATCTTATTGCCTTTACTATTAGGAACTTTTCTCTTGTCTCTAATTGGCTATAAT
TTTAATATAAATCATATTTTTCAAATTCTAGAATGGCTAATTCATGAGGTTGATTTACCCTTACATTATCCTTTGGTTTT
AGGAAATCCTAGGCCAATTGAATTATTAATCTTGTTTTTCCTAATCGGATTATTAATTGATAATCTCTTTAAGAAAAGAA
GACAAATAATTTTTGCTGGCCTAATTGTTTGTAGTTTTTTTATTTGTAAAAATCCAATTTACCCCAGTATCACAGCAGTT
GATATTGGCCAAGGAGATAGTATTTTTTTGCAAGATAAATTTAATAAAGAAACAATTTTGATTGATACAGGCGGACGATT
AGCCCTTCCGCAAGAAAGGTGGCAAAAACCTCAAAGTCAAACAAATGCTGAAAAAACACTCATTCCATATCTTGAATCTG
TTGGAGTGAGTCAAATCGACCAGCTCATTTTGACGCATACGGACGCTGACCATGTTGGAGATTTTTTGAATTTAGATGAT
AAAATAAAAATAAAAGAAATTTGGGTTAGCCCCGGTGAATTGACAAATAATCATTTTGTAGAAAAATTGAAGAAAGCAAA
TGTTACTATTCACATCAGCAAAGTTGGAGATAAAATTCCAATATTTGATAGTGCATTACAAGTTTTATCAAATGGTTATA
CAGGAAAAGGGGATAATAATGATTCTATCGTGACTTATGGAAATTTTTATCATACAAAATTTCTATTTACAGGGGATTTA
GAACAAGAAGGAGAAAAAGAACTGCTCAAGAATTATCCTAAATTGAAAGTTGATGTCTTAAAAGTAGGTCATCATGGCAG
TAAAACAAGTTCAAACCCTGACTTTATTAAAGAAATTAATCCCAAACTTGCCCTCATTTCGGTTGGCAAGGAAAATCGAT
ATGGGCATCCCAATCAAGAAACGCTAGAAACATTAAAAAAATACCAAATCAAAATACTTAGAACCGATCAAAGGGGAGCG
CTTAAATTAATGCAAATCAATCAACAGTGGCGAATCCAAACAGTTAGATAA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (29-171)

• Metallo-beta-lactamase superfamily (Lactamase_B) (483-689)

• Competence protein (Competence) (206-446)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Lactococcus lactis subsp. cremoris KW2	76.766	100	0.768
comEC/celB	Streptococcus mitis SK321	44.744	100	0.451
comEC/celB	Streptococcus mitis NCTC 12261	44.744	100	0.451
comEC/celB	Streptococcus pneumoniae TIGR4	44.011	100	0.444
comEC/celB	Streptococcus pneumoniae Rx1	43.607	100	0.44
comEC/celB	Streptococcus pneumoniae D39	43.607	100	0.44
comEC/celB	Streptococcus pneumoniae R6	43.607	100	0.44