Detailed information NTG0056477

Bioinformatically predicted

Overview

• Name: comR/comR2
• Type: Regulator
• Locus tag: SITYG_RS00080
• Genome accession: NZ_AP014880
• Coordinates: 18940..19413 (+)
• Length: 157 a.a.
• NCBI ID: WP_096362333.1
• Uniprot ID: -
• Organism: Streptococcus intermedius strain TYG1620
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 13940..24413

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SITYG_RS00075 (SITYG_00150)	-	15857..18619 (+)	2763	WP_096362332.1	sialidase domain-containing protein	-
SITYG_RS00080 (SITYG_00160)	comR/comR2	18940..19413 (+)	474	WP_096362333.1	transcriptional regulator	Regulator

Sequence

Protein

• Length: 157 a.a.
• Molecular weight: 19402.35 Da
• Isoelectric Point: 8.9104

>NTDB_id=56477 SITYG_RS00080 WP_096362333.1 18940..19413(+) (comR/comR2) [Streptococcus intermedius strain TYG1620]
MDFKELYEKVRGIVLKSRREYYVHLWELSDWDQEGMMVLYELVSRHPYLVEEEAHLYVYYKTKFRNHIKDILRKQESQKR
KLDRQVYEEVSEIGHKLSLKGLYLDELVILRDQLKSYQKQLSPAKQEQYERLLADERFKGRQAMLRELRTYLKDYEM

Nucleotide

• Length: 474 bp

>NTDB_id=56477 SITYG_RS00080 WP_096362333.1 18940..19413(+) (comR/comR2) [Streptococcus intermedius strain TYG1620]
ATGGATTTCAAGGAGTTATATGAGAAAGTAAGGGGAATTGTGCTGAAGAGTCGACGGGAATATTATGTCCATCTGTGGGA
GCTAAGCGATTGGGACCAAGAAGGGATGATGGTCTTGTATGAGTTGGTAAGTCGCCACCCCTATTTGGTAGAGGAAGAAG
CCCATCTCTATGTCTACTATAAGACAAAGTTTCGGAATCACATAAAGGATATTCTGCGCAAACAAGAAAGTCAAAAGCGC
AAACTGGATCGCCAAGTGTATGAAGAGGTAAGTGAGATTGGGCACAAGTTAAGTCTGAAAGGTCTGTATCTAGACGAGTT
GGTAATACTCCGCGATCAATTAAAGTCCTATCAAAAGCAACTGAGTCCCGCCAAGCAAGAGCAGTATGAGCGGTTACTGG
CAGATGAAAGGTTCAAAGGCCGCCAAGCGATGCTTCGAGAGTTACGAACCTACTTAAAAGACTATGAGATGTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	60	98.726	0.592
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	60	98.726	0.592
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	56.129	98.726	0.554
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	55.484	98.726	0.548
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	54.839	98.726	0.541
comX/sigX/comX1/sigX1	Streptococcus mitis NCTC 12261	54.839	98.726	0.541
comX/comX1	Streptococcus pneumoniae Rx1	54.194	98.726	0.535
comX/comX2	Streptococcus pneumoniae D39	54.194	98.726	0.535
comX/comX1	Streptococcus pneumoniae D39	54.194	98.726	0.535
comX/comX2	Streptococcus pneumoniae R6	54.194	98.726	0.535
comX/comX1	Streptococcus pneumoniae R6	54.194	98.726	0.535
comX/comX2	Streptococcus pneumoniae Rx1	54.194	98.726	0.535
comX/comX1	Streptococcus pneumoniae TIGR4	53.548	98.726	0.529
comX/comX2	Streptococcus pneumoniae TIGR4	53.548	98.726	0.529
comX/sigX	Streptococcus mutans UA159	50.649	98.089	0.497
comX/sigX	Streptococcus suis D9	49.032	98.726	0.484
comX/sigX	Streptococcus suis isolate S10	49.032	98.726	0.484
comX/sigX	Streptococcus suis P1/7	49.032	98.726	0.484
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	43.226	98.726	0.427
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	43.226	98.726	0.427
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	43.226	98.726	0.427
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	43.226	98.726	0.427
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	43.226	98.726	0.427
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	43.226	98.726	0.427
comX	Streptococcus salivarius SK126	42.857	98.089	0.42
comX/sigX	Streptococcus salivarius strain HSISS4	42.208	98.089	0.414
comX	Streptococcus thermophilus LMG 18311	42.208	98.089	0.414
comX	Streptococcus thermophilus LMD-9	42.208	98.089	0.414
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	39.744	99.363	0.395