Detailed information NTG0563112

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: KFZ68_RS14615
• Genome accession: NZ_CP074084
• Coordinates: 3172613..3174145 (-)
• Length: 510 a.a.
• NCBI ID: WP_284647841.1
• Uniprot ID: -
• Organism: Photobacterium damselae strain Pdd1411
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3167613..3179145

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KFZ68_RS14585 (KFZ68_14525)	-	3167620..3168294 (-)	675	WP_065171008.1	FadR/GntR family transcriptional regulator	-
KFZ68_RS14590 (KFZ68_14530)	-	3168675..3168848 (+)	174	WP_005302173.1	hypothetical protein	-
KFZ68_RS14595 (KFZ68_14535)	-	3169024..3169290 (+)	267	WP_005302176.1	YihD family protein	-
KFZ68_RS14600 (KFZ68_14540)	ccoG	3169485..3170816 (+)	1332	Protein_2647	cytochrome c oxidase accessory protein CcoG	-
KFZ68_RS14605 (KFZ68_14545)	-	3170859..3171848 (+)	990	WP_005302181.1	serine/threonine protein kinase	-
KFZ68_RS14610 (KFZ68_14550)	-	3171935..3172537 (+)	603	WP_065171005.1	thiol:disulfide interchange protein DsbA/DsbL	-
KFZ68_RS14615 (KFZ68_14555)	comM	3172613..3174145 (-)	1533	WP_284647841.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
KFZ68_RS14620 (KFZ68_14560)	ilvG	3174685..3176331 (+)	1647	WP_284647842.1	acetolactate synthase 2 catalytic subunit	-
KFZ68_RS14625 (KFZ68_14565)	ilvM	3176334..3176591 (+)	258	WP_036764608.1	acetolactate synthase 2 small subunit	-
KFZ68_RS14630 (KFZ68_14570)	-	3176631..3177560 (+)	930	WP_065171002.1	branched-chain amino acid transaminase	-

Sequence

Protein

• Length: 510 a.a.
• Molecular weight: 55134.48 Da
• Isoelectric Point: 8.2787

>NTDB_id=563112 KFZ68_RS14615 WP_284647841.1 3172613..3174145(-) (comM) [Photobacterium damselae strain Pdd1411]
MSLAIVHSRACVGVQAPAVTVEVHLSNGMPSFTLVGLPETTVKEAKDRVRSAIFNANFEFPSRRITVNLAPADLPKEGGR
FDLPIALGILAASGQIPAESLHKYEFLGELALSGQLRPVKGALPAALAALKVKRCLIVPDRNGDQVALVGEKQHKSAPDL
IQVCAHLLGQQSLSLRFQTKPDDDSLDLTQGRDMQDIIGQQQGKRALEIAAAGGHNLLFLGPPGTGKTMLASRLCDLLPP
MSHDEALETAAVASLTQQSIHQGNWLQRPLRAPHHSSSMAALVGGGSIPRPGEISLAHNGILFLDEMPEFERKVLDSLRE
PLESGEIVISRATSKATFPANFQLIGALNPSPTGFYEGAQTRTNPQVILRYLSKLSGPLLDRFDMSIEIPALPKGTLAQG
GERGESTPVIKARVNQARTLMDLRAGKVNARLSTRELDKHCALAREDAEFLENALHQLGLSIRAYHRIIKVARTIADLSN
CEQIERAHLAEALGYRAMDRLLKQLTAQAI

Nucleotide

• Length: 1533 bp

>NTDB_id=563112 KFZ68_RS14615 WP_284647841.1 3172613..3174145(-) (comM) [Photobacterium damselae strain Pdd1411]
ATGTCATTGGCCATTGTGCATAGCCGGGCTTGCGTTGGGGTACAAGCTCCAGCGGTCACTGTTGAAGTTCATTTAAGTAA
TGGAATGCCCAGTTTTACTCTGGTGGGTTTACCTGAGACAACGGTAAAAGAGGCCAAAGATCGGGTTCGAAGTGCCATTT
TTAATGCCAATTTTGAGTTTCCCTCTCGGCGAATTACCGTCAATTTAGCGCCCGCTGATTTGCCTAAAGAAGGGGGCCGA
TTTGACTTACCCATCGCGCTTGGAATTTTAGCGGCTTCAGGACAAATACCCGCAGAATCGCTGCATAAATATGAATTTTT
AGGGGAGTTAGCCTTATCGGGGCAATTGCGTCCGGTGAAGGGGGCACTGCCTGCTGCTCTTGCTGCATTAAAGGTAAAAA
GGTGTTTGATTGTCCCTGATCGTAATGGCGATCAAGTGGCATTAGTAGGTGAAAAACAACATAAGTCAGCGCCTGATTTG
ATCCAAGTTTGCGCTCACCTATTAGGACAGCAAAGTTTATCTTTACGCTTTCAAACAAAACCCGATGATGATTCGTTAGA
TCTGACTCAGGGGCGAGATATGCAAGATATTATTGGTCAGCAGCAAGGTAAGCGGGCATTGGAAATTGCAGCTGCTGGTG
GCCATAATCTTCTATTTCTTGGGCCGCCAGGAACGGGAAAAACCATGTTAGCCTCTCGGTTATGTGATTTATTACCTCCC
ATGAGCCATGATGAGGCGTTAGAAACTGCAGCTGTTGCCTCGCTGACTCAGCAGAGCATTCATCAAGGCAATTGGTTACA
ACGACCGCTACGTGCACCTCATCATTCAAGTTCTATGGCTGCCTTAGTTGGAGGGGGGTCAATTCCAAGGCCAGGAGAGA
TCTCTTTGGCGCATAACGGCATTCTTTTTTTAGATGAAATGCCCGAATTTGAGCGTAAGGTTTTGGACTCATTACGTGAA
CCTTTAGAGTCGGGAGAGATTGTGATTTCTCGGGCAACCAGTAAAGCAACCTTTCCGGCAAATTTTCAATTGATTGGAGC
GCTAAATCCGAGTCCAACAGGATTTTATGAAGGCGCACAAACTCGAACTAATCCTCAAGTTATTTTGCGCTATCTCAGTA
AACTCTCTGGCCCGCTGCTTGATAGGTTTGATATGTCGATTGAGATCCCTGCTCTGCCTAAAGGTACTTTAGCTCAAGGT
GGCGAGCGCGGTGAGAGCACTCCTGTGATTAAAGCGCGAGTTAATCAGGCGCGAACCTTAATGGATCTGCGAGCAGGAAA
AGTGAATGCTCGACTCTCTACTCGGGAGTTAGATAAACATTGCGCTCTGGCTCGAGAAGATGCGGAGTTTCTTGAAAATG
CACTGCATCAGTTGGGGCTATCGATTCGTGCGTACCACCGCATTATTAAGGTGGCACGAACCATTGCCGATTTAAGTAAT
TGTGAGCAGATAGAGCGAGCGCATTTAGCTGAAGCATTAGGATATCGAGCAATGGATCGGTTATTGAAGCAGTTAACGGC
TCAAGCGATATGA

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (404-496)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (193-394)

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio campbellii strain DS40M4	76.863	100	0.769
comM	Vibrio cholerae strain A1552	76.667	100	0.767
comM	Glaesserella parasuis strain SC1401	63.137	100	0.631
comM	Haemophilus influenzae Rd KW20	62.722	99.412	0.624
comM	Legionella pneumophila str. Paris	49.699	97.843	0.486
comM	Legionella pneumophila strain ERS1305867	49.699	97.843	0.486
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	43.083	99.216	0.427