Detailed information NTG0560411

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: KEM63_RS00545
• Genome accession: NZ_CP073751
• Coordinates: 123593..125098 (-)
• Length: 501 a.a.
• NCBI ID: WP_223653965.1
• Uniprot ID: -
• Organism: Halopseudomonas nanhaiensis strain SCS 2-3
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 118593..130098

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KEM63_RS00530 (KEM63_00530)	-	119227..119661 (+)	435	WP_223653959.1	c-type cytochrome	-
KEM63_RS00535 (KEM63_00535)	rep	119723..121729 (-)	2007	WP_223653961.1	DNA helicase Rep	-
KEM63_RS00540 (KEM63_00540)	-	121919..123589 (+)	1671	WP_223653963.1	bifunctional diguanylate cyclase/phosphodiesterase	-
KEM63_RS00545 (KEM63_00545)	comM	123593..125098 (-)	1506	WP_223653965.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
KEM63_RS00550 (KEM63_00550)	-	125130..125405 (-)	276	WP_223653967.1	accessory factor UbiK family protein	-
KEM63_RS00555 (KEM63_00555)	glnK	125911..126249 (+)	339	WP_093396590.1	P-II family nitrogen regulator	-
KEM63_RS00560 (KEM63_00560)	-	126300..127550 (+)	1251	WP_223653968.1	ammonium transporter	-
KEM63_RS00565 (KEM63_00565)	-	127632..128054 (+)	423	WP_223653978.1	secondary thiamine-phosphate synthase enzyme YjbQ	-
KEM63_RS00570 (KEM63_00570)	-	128156..128614 (+)	459	WP_223653980.1	hypothetical protein	-
KEM63_RS00575 (KEM63_00575)	-	129018..130025 (+)	1008	WP_223653982.1	ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 501 a.a.
• Molecular weight: 53620.47 Da
• Isoelectric Point: 7.2628

>NTDB_id=560411 KEM63_RS00545 WP_223653965.1 123593..125098(-) (comM) [Halopseudomonas nanhaiensis strain SCS 2-3]
MSLAIVHSRAKLGVQAPTVTVEIHLANGMPSLTLVGLPETAVRESKDRVRSALQNARLDFPSLKRITINLAPADLPKEGG
RFDLAIALGLLAASGQIPADSLEHCECLGELALSGELRPVQGVLPAAIACREAGRTLLLPRANAAEAAMVRGVHIVAADH
ILELCEHLRGERELHPVPAHTSIPASGYADLAEVQGQAQAKRALIVAASGAHNLLLFGPPGTGKTLLASRLPGLLPPLAE
DEALEVAAVQSVCGRGPLTQWPARPFRAPHHGASAAALVGGGSQPRPGEISQAHHGVLFLDELPEFDRKVLEMLREPMES
GAVHIARAREQLTFPARFQLIAAMNPCPCGYQGDPSGRCRCSAEQVERYRNKLSGPLLDRIDLHLAMHNEPFTLEQSGDN
RPTTAEAAAAVAAARAVQLDRQGCLNAHLDLAALRDHCAVSSEDARWMEKAIERLGLSRRASHRALKVARTVADLEGVDT
LQRAHLAEALQYRQLDRQPGR

Nucleotide

• Length: 1506 bp

>NTDB_id=560411 KEM63_RS00545 WP_223653965.1 123593..125098(-) (comM) [Halopseudomonas nanhaiensis strain SCS 2-3]
ATGTCCCTTGCCATCGTGCACAGCCGTGCCAAGCTCGGCGTCCAGGCTCCGACCGTCACGGTCGAAATTCATCTCGCCAA
CGGCATGCCCAGCCTGACGCTGGTCGGGCTACCTGAAACAGCTGTTCGCGAGAGCAAGGACCGTGTGCGCAGTGCTCTGC
AGAACGCGCGCCTGGACTTCCCGAGCCTCAAACGCATCACCATCAACCTGGCGCCTGCCGACCTGCCAAAGGAGGGCGGG
CGATTCGATCTGGCTATCGCCCTCGGCCTGCTCGCCGCGAGCGGACAGATTCCCGCCGACAGTCTCGAGCACTGCGAGTG
CCTGGGTGAATTGGCACTGTCCGGAGAGCTGCGCCCGGTCCAGGGCGTGTTACCTGCCGCGATAGCCTGCCGGGAAGCCG
GTAGAACGCTGTTGCTGCCCCGCGCCAATGCTGCCGAGGCGGCCATGGTCCGTGGCGTGCATATCGTCGCGGCCGATCAC
ATTCTCGAACTGTGTGAGCATTTGCGCGGCGAACGTGAGCTGCATCCGGTGCCGGCACACACCAGCATCCCAGCCAGTGG
CTACGCCGACCTGGCCGAGGTCCAGGGTCAGGCGCAGGCCAAGCGCGCCCTGATCGTGGCCGCCAGCGGTGCGCACAACC
TGCTGCTCTTCGGTCCTCCAGGAACCGGCAAGACTCTGCTGGCCAGCCGGTTACCGGGATTGCTGCCGCCCCTGGCAGAA
GACGAAGCGCTGGAGGTGGCCGCCGTACAATCAGTGTGTGGACGCGGCCCGCTGACGCAATGGCCGGCCCGCCCGTTTCG
CGCGCCTCACCATGGTGCATCGGCTGCGGCACTGGTCGGAGGTGGCAGTCAGCCGCGTCCCGGTGAGATCAGTCAGGCGC
ACCACGGCGTTCTGTTTCTCGATGAGCTGCCGGAATTTGATCGGAAGGTGCTGGAGATGCTCCGCGAGCCGATGGAATCC
GGAGCGGTGCATATTGCCAGAGCACGCGAGCAGCTGACGTTTCCCGCCCGCTTTCAACTGATTGCAGCCATGAACCCGTG
CCCCTGCGGCTATCAGGGCGACCCTTCGGGGCGCTGCCGCTGCTCTGCCGAGCAGGTGGAGCGCTATCGCAACAAACTGT
CCGGCCCGCTGCTGGACCGTATCGACCTGCATCTGGCCATGCACAACGAACCGTTCACGCTGGAGCAGTCGGGTGACAAC
AGACCGACGACCGCTGAAGCCGCAGCCGCAGTCGCCGCGGCGCGGGCAGTTCAGCTTGATCGTCAGGGCTGCCTGAACGC
GCATCTGGATCTTGCCGCGCTCAGGGATCACTGCGCCGTGTCCAGCGAAGATGCCCGCTGGATGGAAAAGGCCATCGAAA
GGCTGGGATTATCGCGTCGAGCCAGTCATCGGGCGCTGAAGGTGGCACGTACTGTGGCGGATCTGGAAGGGGTCGACACG
CTGCAGAGAGCGCATCTCGCCGAAGCGCTGCAGTACCGTCAACTGGATCGTCAGCCCGGACGCTGA

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (403-493)

• Subunit ChlI of Mg-chelatase (ChlI) (21-143)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (190-390)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio campbellii strain DS40M4	54.832	100	0.555
comM	Vibrio cholerae strain A1552	54.092	100	0.541
comM	Glaesserella parasuis strain SC1401	53.36	100	0.539
comM	Haemophilus influenzae Rd KW20	52.277	100	0.527
comM	Legionella pneumophila str. Paris	48.008	100	0.481
comM	Legionella pneumophila strain ERS1305867	48.008	100	0.481
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	45.187	100	0.459