Detailed information NTG0559601

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: KEF49_RS12240
• Genome accession: NZ_CP073635
• Coordinates: 2436394..2438745 (-)
• Length: 783 a.a.
• NCBI ID: WP_212098512.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain Ba13
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2431394..2443745

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KEF49_RS12205 (KEF49_12205)	-	2431756..2432094 (-)	339	WP_045510470.1	YqxA family protein	-
KEF49_RS12210 (KEF49_12210)	-	2432111..2433304 (-)	1194	WP_212098511.1	stage II sporulation protein P	-
KEF49_RS12215 (KEF49_12215)	gpr	2433372..2434478 (-)	1107	WP_014470697.1	GPR endopeptidase	-
KEF49_RS12220 (KEF49_12220)	rpsT	2434681..2434947 (+)	267	WP_003152876.1	30S ribosomal protein S20	-
KEF49_RS12225 (KEF49_12225)	holA	2434965..2436006 (-)	1042	Protein_2385	DNA polymerase III subunit delta	-
KEF49_RS12230 (KEF49_12230)	-	2436046..2436200 (-)	155	Protein_2386	hypothetical protein	-
KEF49_RS12235 (KEF49_12235)	-	2436241..2436375 (+)	135	WP_003152870.1	YqzM family protein	-
KEF49_RS12240 (KEF49_12240)	comEC	2436394..2438745 (-)	2352	WP_212098512.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
KEF49_RS12245 (KEF49_12245)	-	2438746..2439315 (-)	570	WP_065981916.1	ComE operon protein 2	-
KEF49_RS12250 (KEF49_12250)	comEA	2439381..2439995 (-)	615	WP_212098514.1	helix-hairpin-helix domain-containing protein	Machinery gene
KEF49_RS12255 (KEF49_12255)	comER	2440055..2440876 (+)	822	WP_065981918.1	late competence protein ComER	-
KEF49_RS12260 (KEF49_12260)	-	2440945..2441682 (-)	738	WP_014470703.1	class I SAM-dependent methyltransferase	-
KEF49_RS12265 (KEF49_12265)	rsfS	2441679..2442035 (-)	357	WP_115997664.1	ribosome silencing factor	-
KEF49_RS12270 (KEF49_12270)	yqeK	2442052..2442612 (-)	561	WP_032856887.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
KEF49_RS12275 (KEF49_12275)	-	2442602..2443171 (-)	570	WP_065981920.1	nicotinate-nucleotide adenylyltransferase	-
KEF49_RS12280 (KEF49_12280)	yhbY	2443182..2443472 (-)	291	WP_014470707.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 783 a.a.
• Molecular weight: 87170.04 Da
• Isoelectric Point: 9.1300

>NTDB_id=559601 KEF49_RS12240 WP_212098512.1 2436394..2438745(-) (comEC) [Bacillus amyloliquefaciens strain Ba13]
MKYKYLLLPLAAVSATAGIAAANSFWILFFFLLYLLFIIVKIKQHTPVIVCLVSFCLYFFIYTACDAANVSRYQAGSYTE
QALIINIPKVDGAKMSAVIRTHDKEKWAASYKIRSLEEKKLIEQLEPGMRCTFTGSLEQPGHATIPGGFDYKEYLYSQHI
HWIFSVTSIKQCEKSEQPLFKLLNIRKNLISIIRNHVPESSAGIVEALTLGERFSIEDDILSAYQNLGVVHLMAISGMHV
GLITAGLFYALIRIGLTREKAGMLLLLFLPVYTLLSGAAPSVLRASLMLGFYIAGTLLKRSIHSSAALSMSYLLLLLFDP
YLLWQAGFQLSFAVSAALILSSSILKKAGKNRLAGLAMASFIAELSSLPFLLYHFQQISLVSFPMNMVMVPFYTLFVIPF
SVIGFLLLLFSRQAGEFLFYLFDLVMKPVHDFITYAASVDLFAMIASKPDFLSLLMLAVSVFTLFAALEKRGFLKLRKSA
LFFFAVLAYIMFRPYFSPWGEADMLDIGQGDSLFISAPHRKGTVMVDTGGVIAYSEESWKEKHHPYSIGEKALIPFLNGK
GVKKLDALILTHADQDHIGEAGVLIKKHKVKRLIVPVGFVKEQKDREILNMAKENNIPVAEAKRGDTITAGDLQFQVLSP
ESPDGRSKNDSSLVLWTVLGGVSWLLTGDLESDGETEVLKTYPNLKADILKAGHHGSKSSTSEAFLKQLQPETALISAGK
DNRYHHPHEEVLERLKAYSVNVLRTDVSGTIQYRFKKGAGTFSVFPPYDIEETRAQEVKKTAD

Nucleotide

• Length: 2352 bp

>NTDB_id=559601 KEF49_RS12240 WP_212098512.1 2436394..2438745(-) (comEC) [Bacillus amyloliquefaciens strain Ba13]
ATGAAATATAAATACCTTCTTCTCCCTCTGGCGGCGGTTTCTGCAACCGCGGGAATTGCCGCCGCTAATTCCTTCTGGAT
CCTATTCTTTTTCCTTCTGTATCTTCTCTTTATTATCGTAAAAATAAAGCAGCACACACCGGTTATCGTCTGCCTCGTTT
CTTTTTGTCTTTATTTCTTTATTTATACGGCTTGTGACGCTGCGAATGTATCCCGGTATCAGGCCGGCAGCTATACTGAA
CAGGCTCTCATAATAAACATTCCGAAGGTTGACGGAGCGAAAATGTCAGCCGTTATCCGTACCCATGACAAAGAAAAATG
GGCTGCTTCGTACAAAATCCGGTCCCTTGAAGAAAAAAAACTCATTGAACAGCTGGAACCGGGGATGCGCTGTACGTTTA
CAGGCTCACTGGAACAGCCCGGACATGCGACGATTCCCGGGGGTTTTGATTATAAGGAATATCTTTACTCCCAGCATATT
CACTGGATATTTTCCGTTACTTCCATTAAGCAGTGCGAAAAATCCGAACAGCCGCTGTTTAAGCTTCTGAACATCAGAAA
GAATTTGATTTCGATCATTCGGAATCATGTACCTGAATCTTCCGCGGGAATTGTTGAAGCGCTGACCTTAGGTGAAAGAT
TTTCTATAGAGGACGACATACTGAGCGCTTATCAAAATTTGGGAGTCGTTCATTTAATGGCGATTTCCGGAATGCATGTC
GGTCTTATTACGGCGGGATTATTTTATGCCCTTATCAGAATTGGACTGACAAGAGAAAAGGCGGGGATGTTGCTGCTGCT
TTTTTTGCCGGTGTATACGTTGTTAAGCGGTGCCGCCCCTTCTGTACTGCGCGCATCCCTCATGCTGGGATTTTATATCG
CCGGAACTCTTTTGAAACGCAGCATTCATTCCTCGGCTGCATTGTCCATGTCTTATCTGCTGCTTCTGCTGTTTGATCCT
TACCTCCTTTGGCAGGCGGGCTTCCAGCTTTCCTTTGCGGTAAGCGCCGCTTTAATTCTGTCATCCTCCATTTTAAAGAA
AGCAGGGAAAAACAGACTCGCAGGGCTTGCGATGGCTTCATTCATTGCGGAGCTCAGTTCGCTTCCGTTTCTTCTCTATC
ATTTTCAGCAGATTTCGCTCGTCAGTTTTCCGATGAATATGGTGATGGTGCCTTTTTATACGTTATTTGTCATTCCGTTT
TCTGTCATCGGTTTCCTTCTTCTCTTATTTTCCAGGCAGGCGGGGGAATTTTTGTTTTACCTGTTTGACCTTGTGATGAA
GCCTGTGCATGATTTCATTACATATGCGGCATCCGTTGATTTATTTGCAATGATTGCGTCAAAGCCTGACTTTCTGTCGC
TTCTTATGCTTGCGGTTTCCGTTTTTACGCTTTTTGCAGCTTTGGAAAAGAGAGGTTTTTTAAAGCTCAGGAAATCGGCT
CTTTTTTTCTTTGCGGTTTTGGCTTATATAATGTTCCGTCCTTATTTCAGTCCTTGGGGAGAAGCGGATATGCTTGATAT
CGGGCAGGGAGATTCACTGTTTATAAGTGCCCCGCACCGTAAAGGTACCGTAATGGTTGATACAGGAGGAGTGATTGCTT
ATTCCGAAGAATCGTGGAAAGAAAAACACCACCCGTATTCTATCGGCGAGAAGGCTTTAATTCCGTTTTTGAACGGAAAG
GGAGTGAAAAAGCTGGATGCACTGATTTTAACCCATGCGGATCAGGATCATATCGGGGAAGCCGGAGTATTAATCAAAAA
ACATAAAGTGAAACGGTTAATTGTCCCCGTGGGGTTCGTGAAGGAACAGAAGGATCGGGAAATATTGAATATGGCGAAAG
AAAATAACATTCCCGTTGCAGAAGCAAAACGGGGCGATACCATAACAGCCGGTGATCTTCAGTTTCAGGTGCTGTCTCCG
GAGTCGCCTGACGGAAGGAGTAAAAATGATTCGTCACTGGTGCTTTGGACGGTTTTAGGCGGAGTGAGCTGGCTTTTGAC
GGGAGATTTAGAATCGGACGGCGAAACAGAGGTGCTGAAAACGTATCCGAATCTGAAGGCCGATATATTGAAGGCCGGTC
ATCACGGCAGCAAAAGCTCTACGAGTGAAGCCTTTTTGAAACAGCTTCAGCCGGAGACAGCGCTGATTTCAGCAGGAAAA
GATAATCGCTATCATCATCCGCATGAAGAAGTGCTGGAGCGTCTGAAAGCTTACTCTGTCAATGTGCTTCGCACTGATGT
TAGCGGAACGATTCAATACAGATTTAAAAAAGGCGCCGGAACGTTTTCTGTCTTCCCTCCATATGATATAGAAGAAACCA
GGGCGCAGGAAGTAAAAAAGACTGCCGATTGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (508-719)

• Competence protein (Competence) (208-470)

• Domain of unknown function (DUF4131) (DUF4131) (26-171)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	55.829	98.595	0.55