Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | J8N01_RS05950 | Genome accession | NZ_CP073301 |
| Coordinates | 765887..766939 (+) | Length | 350 a.a. |
| NCBI ID | WP_274496240.1 | Uniprot ID | - |
| Organism | Priestia megaterium strain HT517 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 760887..771939
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J8N01_RS05915 (J8N01_05835) | - | 761455..761661 (+) | 207 | WP_013059184.1 | YqgQ family protein | - |
| J8N01_RS05920 (J8N01_05840) | - | 761664..762631 (+) | 968 | Protein_756 | ROK family glucokinase | - |
| J8N01_RS05925 (J8N01_05845) | - | 762743..763645 (+) | 903 | WP_013059182.1 | M14 family metallopeptidase | - |
| J8N01_RS05930 (J8N01_05850) | - | 763681..763857 (-) | 177 | WP_013059181.1 | DUF2759 domain-containing protein | - |
| J8N01_RS05935 (J8N01_05855) | - | 764066..764698 (+) | 633 | WP_274496239.1 | MBL fold metallo-hydrolase | - |
| J8N01_RS05940 (J8N01_05860) | - | 764736..764972 (-) | 237 | WP_013059179.1 | DUF2626 domain-containing protein | - |
| J8N01_RS05945 (J8N01_05865) | - | 765234..765617 (+) | 384 | WP_013059178.1 | Spx/MgsR family RNA polymerase-binding regulatory protein | - |
| J8N01_RS05950 (J8N01_05870) | comGA | 765887..766939 (+) | 1053 | WP_274496240.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| J8N01_RS05955 (J8N01_05875) | comGB | 767008..767976 (+) | 969 | WP_231101784.1 | competence type IV pilus assembly protein ComGB | - |
| J8N01_RS05960 (J8N01_05880) | comGC | 767991..768302 (+) | 312 | WP_013059175.1 | competence type IV pilus major pilin ComGC | - |
| J8N01_RS05965 (J8N01_05885) | comGD | 768289..768726 (+) | 438 | WP_013059174.1 | competence type IV pilus minor pilin ComGD | - |
| J8N01_RS05970 (J8N01_05890) | - | 768710..769048 (+) | 339 | WP_013059173.1 | type II secretion system protein | - |
| J8N01_RS05975 (J8N01_05895) | comGF | 769045..769482 (+) | 438 | WP_013059172.1 | competence type IV pilus minor pilin ComGF | - |
| J8N01_RS05980 (J8N01_05900) | comGG | 769472..769846 (+) | 375 | WP_013059171.1 | competence type IV pilus minor pilin ComGG | - |
| J8N01_RS05985 (J8N01_05905) | - | 769890..770075 (+) | 186 | WP_013059170.1 | YqzE family protein | - |
| J8N01_RS05990 (J8N01_05910) | - | 770100..770924 (-) | 825 | WP_274496241.1 | YqhG family protein | - |
Sequence
Protein
Download Length: 350 a.a. Molecular weight: 39614.98 Da Isoelectric Point: 9.0586
>NTDB_id=558903 J8N01_RS05950 WP_274496240.1 765887..766939(+) (comGA) [Priestia megaterium strain HT517]
MTEIEQFATYIIRDACECRSSDVHIVSRKKDAVIQLRIDQELILKRVISKEMSERLISHFKFLGGMDIGERRKPQNGALT
TSIDHYQVNLRLSTLPTSHDESLVIRLLPHQQSTSLKHLSLFPEHTKKLISLLKFSHGLIIFTGPTGSGKTTTLYTLLHE
VKHLFNRNVITLEDPIEKPSETVLQVQVNERAGITYTTGLKAILRHDPDIIMVGEIRDSETAKIAVRAALTGHLVLTTMH
TKDTKGSLYRLLEFGVSFQEMEQTLVAVAAQRLVEIRCPLCSGKCHPACKKMRKHRQSSIYELLYGKELSAVMREVKGEN
ADYDYKTLRDVILKGIALGYLYPHSLDGWG
MTEIEQFATYIIRDACECRSSDVHIVSRKKDAVIQLRIDQELILKRVISKEMSERLISHFKFLGGMDIGERRKPQNGALT
TSIDHYQVNLRLSTLPTSHDESLVIRLLPHQQSTSLKHLSLFPEHTKKLISLLKFSHGLIIFTGPTGSGKTTTLYTLLHE
VKHLFNRNVITLEDPIEKPSETVLQVQVNERAGITYTTGLKAILRHDPDIIMVGEIRDSETAKIAVRAALTGHLVLTTMH
TKDTKGSLYRLLEFGVSFQEMEQTLVAVAAQRLVEIRCPLCSGKCHPACKKMRKHRQSSIYELLYGKELSAVMREVKGEN
ADYDYKTLRDVILKGIALGYLYPHSLDGWG
Nucleotide
Download Length: 1053 bp
>NTDB_id=558903 J8N01_RS05950 WP_274496240.1 765887..766939(+) (comGA) [Priestia megaterium strain HT517]
TTGACCGAAATTGAACAGTTTGCTACTTACATTATACGAGATGCATGTGAGTGCCGAAGTTCTGATGTGCATATTGTGTC
CCGAAAGAAAGATGCTGTGATTCAGCTGCGAATTGACCAGGAGCTTATTTTAAAGAGGGTTATTTCAAAGGAAATGTCTG
AACGGCTCATTTCGCATTTTAAATTTTTAGGGGGAATGGATATTGGCGAGCGCAGAAAACCTCAAAATGGTGCATTGACC
ACTTCCATTGATCACTATCAAGTAAATTTGCGTTTATCAACCCTTCCTACTTCTCATGATGAAAGTCTTGTTATTCGGCT
TTTGCCTCATCAACAATCTACATCTCTCAAACATTTATCTCTTTTTCCTGAACACACTAAAAAGCTTATTTCTCTCTTGA
AATTCTCTCATGGATTAATTATTTTTACGGGTCCTACAGGGTCAGGTAAAACCACTACTCTATATACTCTTTTACACGAA
GTAAAGCACCTTTTTAATCGAAATGTTATTACACTAGAAGATCCTATTGAAAAACCGAGTGAAACCGTGCTTCAAGTACA
GGTAAATGAACGGGCGGGGATTACGTACACGACTGGTTTAAAAGCTATATTGCGCCATGACCCAGACATTATCATGGTGG
GAGAAATAAGAGATAGTGAGACTGCCAAAATTGCTGTGAGAGCAGCACTTACCGGACACTTGGTTTTGACAACGATGCAT
ACTAAAGATACAAAAGGATCTTTGTACAGGCTGCTTGAATTTGGGGTTAGCTTTCAAGAAATGGAACAGACTCTTGTAGC
AGTAGCTGCACAGCGCCTTGTAGAAATTCGCTGTCCGCTGTGTTCCGGAAAATGCCACCCCGCTTGTAAAAAAATGAGAA
AGCATCGTCAGTCCAGCATATACGAATTGCTTTATGGCAAGGAGCTTAGTGCAGTGATGAGAGAAGTGAAAGGAGAAAAT
GCGGATTATGATTATAAGACGCTCCGAGATGTGATTCTAAAAGGAATCGCGCTAGGCTATTTATATCCGCATTCGCTAGA
CGGATGGGGGTAA
TTGACCGAAATTGAACAGTTTGCTACTTACATTATACGAGATGCATGTGAGTGCCGAAGTTCTGATGTGCATATTGTGTC
CCGAAAGAAAGATGCTGTGATTCAGCTGCGAATTGACCAGGAGCTTATTTTAAAGAGGGTTATTTCAAAGGAAATGTCTG
AACGGCTCATTTCGCATTTTAAATTTTTAGGGGGAATGGATATTGGCGAGCGCAGAAAACCTCAAAATGGTGCATTGACC
ACTTCCATTGATCACTATCAAGTAAATTTGCGTTTATCAACCCTTCCTACTTCTCATGATGAAAGTCTTGTTATTCGGCT
TTTGCCTCATCAACAATCTACATCTCTCAAACATTTATCTCTTTTTCCTGAACACACTAAAAAGCTTATTTCTCTCTTGA
AATTCTCTCATGGATTAATTATTTTTACGGGTCCTACAGGGTCAGGTAAAACCACTACTCTATATACTCTTTTACACGAA
GTAAAGCACCTTTTTAATCGAAATGTTATTACACTAGAAGATCCTATTGAAAAACCGAGTGAAACCGTGCTTCAAGTACA
GGTAAATGAACGGGCGGGGATTACGTACACGACTGGTTTAAAAGCTATATTGCGCCATGACCCAGACATTATCATGGTGG
GAGAAATAAGAGATAGTGAGACTGCCAAAATTGCTGTGAGAGCAGCACTTACCGGACACTTGGTTTTGACAACGATGCAT
ACTAAAGATACAAAAGGATCTTTGTACAGGCTGCTTGAATTTGGGGTTAGCTTTCAAGAAATGGAACAGACTCTTGTAGC
AGTAGCTGCACAGCGCCTTGTAGAAATTCGCTGTCCGCTGTGTTCCGGAAAATGCCACCCCGCTTGTAAAAAAATGAGAA
AGCATCGTCAGTCCAGCATATACGAATTGCTTTATGGCAAGGAGCTTAGTGCAGTGATGAGAGAAGTGAAAGGAGAAAAT
GCGGATTATGATTATAAGACGCTCCGAGATGTGATTCTAAAAGGAATCGCGCTAGGCTATTTATATCCGCATTCGCTAGA
CGGATGGGGGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
58.286 |
100 |
0.583 |