Detailed information NTG0558662

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: KCX77_RS17870
• Genome accession: NZ_CP073265
• Coordinates: 3571671..3572360 (-)
• Length: 229 a.a.
• NCBI ID: WP_283246635.1
• Uniprot ID: -
• Organism: Bacillus atrophaeus strain CNY01
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3566671..3577360

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KCX77_RS17835 (KCX77_17835)	fliW	3566814..3567245 (-)	432	WP_061570800.1	flagellar assembly protein FliW	-
KCX77_RS17840 (KCX77_17840)	-	3567280..3567846 (-)	567	WP_003326726.1	DUF6470 family protein	-
KCX77_RS17845 (KCX77_17845)	flgL	3567894..3568790 (-)	897	WP_088118067.1	flagellar hook-associated protein FlgL	-
KCX77_RS17850 (KCX77_17850)	flgK	3568802..3570325 (-)	1524	WP_212063891.1	flagellar hook-associated protein FlgK	-
KCX77_RS17855 (KCX77_17855)	-	3570342..3570824 (-)	483	WP_088118069.1	flagellar protein FlgN	-
KCX77_RS17860 (KCX77_17860)	flgM	3570840..3571100 (-)	261	WP_003326722.1	flagellar biosynthesis anti-sigma factor FlgM	-
KCX77_RS17865 (KCX77_17865)	-	3571180..3571599 (-)	420	WP_212063892.1	TIGR03826 family flagellar region protein	-
KCX77_RS17870 (KCX77_17870)	comFC	3571671..3572360 (-)	690	WP_283246635.1	double zinc ribbon domain-containing protein	Machinery gene
KCX77_RS17875 (KCX77_17875)	-	3572357..3572653 (-)	297	WP_106033805.1	late competence development ComFB family protein	-
KCX77_RS17880 (KCX77_17880)	comFA	3572710..3574107 (-)	1398	WP_212063894.1	ATP-dependent helicase ComFA	Machinery gene
KCX77_RS17885 (KCX77_17885)	-	3574214..3575056 (-)	843	WP_003326716.1	DegV family protein	-
KCX77_RS17890 (KCX77_17890)	degU	3575163..3575852 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
KCX77_RS17895 (KCX77_17895)	degS	3575929..3577092 (-)	1164	WP_212063895.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 229 a.a.
• Molecular weight: 26292.25 Da
• Isoelectric Point: 8.3348

>NTDB_id=558662 KCX77_RS17870 WP_283246635.1 3571671..3572360(-) (comFC) [Bacillus atrophaeus strain CNY01]
MNCLLCNSQFSQSLTWRSLFLLEPDEKVCHPCKRQLQRIAGTVCPSCGRPQNTNEKCPDCTEWESRIDRGFLLSRNRSVY
LYNEMMKESLARFKFRGDAELLHVFKTDFVSEFSTVYPEKSYVLIPIPLSEERKAERGFNQSELLAKCLGRPIIHSLTRL
DNEKQSKKNKAERLLFKRVFDTEINSVGDMDVILIDDLYTTGATLHHAARCLLEKGKAGSVSSFTLIRS

Nucleotide

• Length: 690 bp

>NTDB_id=558662 KCX77_RS17870 WP_283246635.1 3571671..3572360(-) (comFC) [Bacillus atrophaeus strain CNY01]
CTGAACTGCTTATTGTGTAATTCGCAGTTTTCTCAATCTCTTACGTGGAGATCTTTATTTTTATTAGAGCCGGACGAAAA
GGTCTGTCATCCGTGCAAAAGACAATTACAAAGGATCGCAGGAACGGTTTGCCCTTCATGCGGCAGACCTCAAAACACAA
ATGAAAAATGCCCCGATTGCACCGAATGGGAATCAAGGATTGATAGAGGCTTCCTTTTAAGCCGAAACCGTTCTGTTTAT
TTATATAATGAGATGATGAAAGAATCGCTGGCCCGTTTTAAATTCAGAGGAGACGCAGAGCTTTTGCATGTTTTTAAGAC
TGATTTTGTATCGGAATTTTCAACTGTCTATCCTGAAAAAAGCTATGTGCTCATTCCAATCCCGCTGAGTGAGGAACGGA
AAGCAGAGCGCGGGTTTAACCAGTCAGAACTTCTGGCGAAATGTTTAGGCCGGCCCATCATTCATTCCCTAACCCGTCTG
GATAATGAAAAACAATCCAAGAAAAACAAAGCGGAACGGCTCCTTTTCAAACGTGTTTTTGATACTGAAATCAATTCCGT
TGGAGATATGGATGTTATATTAATCGATGATCTTTATACCACTGGCGCTACCTTACACCATGCAGCCCGCTGTTTATTGG
AAAAAGGAAAAGCAGGCTCTGTGTCCTCTTTTACTTTAATCAGAAGCTAA

Domains

Predicted by InterproScan.

• Double zinc ribbon domain (DZR_2) (2-60)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	66.96	99.127	0.664
comFC/cflB	Streptococcus pneumoniae TIGR4	37.118	100	0.371
comFC/cflB	Streptococcus pneumoniae Rx1	37.118	100	0.371
comFC/cflB	Streptococcus pneumoniae D39	37.118	100	0.371
comFC/cflB	Streptococcus pneumoniae R6	37.118	100	0.371