Detailed information NTG0557937

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: KCX70_RS02450
• Genome accession: NZ_CP073105
• Coordinates: 506070..507134 (+)
• Length: 354 a.a.
• NCBI ID: WP_212619177.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain F2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 501070..512134

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KCX70_RS02435 (KCX70_02435)	-	501075..501866 (+)	792	WP_212619175.1	thermonuclease family protein	-
KCX70_RS02440 (KCX70_02440)	-	502031..503299 (+)	1269	WP_021207102.1	malic enzyme-like NAD(P)-binding protein	-
KCX70_RS02445 (KCX70_02445)	-	503451..505886 (-)	2436	WP_212619176.1	penicillin-binding protein 1A	-
KCX70_RS02450 (KCX70_02450)	comM	506070..507134 (+)	1065	WP_212619177.1	pilus assembly protein PilM	Machinery gene
KCX70_RS02455 (KCX70_02455)	pilN	507134..507706 (+)	573	WP_212619178.1	type 4a pilus biogenesis protein PilN	-
KCX70_RS02460 (KCX70_02460)	pilO	507703..508326 (+)	624	WP_212619179.1	type 4a pilus biogenesis protein PilO	-
KCX70_RS02465 (KCX70_02465)	pilP	508323..508850 (+)	528	WP_212619180.1	type 4a pilus biogenesis lipoprotein PilP	-
KCX70_RS02470 (KCX70_02470)	pilQ	508902..511046 (+)	2145	WP_212619181.1	type IV pilus secretin PilQ	Machinery gene
KCX70_RS02475 (KCX70_02475)	aroK	511053..511598 (+)	546	WP_212619182.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37771.16 Da
• Isoelectric Point: 4.6313

>NTDB_id=557937 KCX70_RS02450 WP_212619177.1 506070..507134(+) (comM) [Stutzerimonas stutzeri strain F2]
MLGLFTKKANTLLGIDISSTSVKLLELSRSGSRYRVESYAVEPLPANAVVEKNIAELEGVGQALSRLLTKAKTGVKSAAV
AVSGSAVITKSIEMDGGLSDDELENQLKIEADQYIPYPLEEVAIDFEVQGPAARAPGRVEVLLAACRKENVEIREAALAL
AGLTAKIVDVEAYALERSYGLLAPQLGAGHDELTVALVDIGATMTTLSVLHNGRTIYTREQLFGGRQLTEEIQRRYGLSM
EEAGLAKKQGGLPDDYDSEVLQPFKEAVVQQVSRSLQFFFAAGQFHDVDYILLAGGTASIPGLDRLIQQKIGTQTLVANP
FADMALSSKVNAGALASDAPSLMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=557937 KCX70_RS02450 WP_212619177.1 506070..507134(+) (comM) [Stutzerimonas stutzeri strain F2]
GTGCTAGGGCTCTTCACTAAGAAAGCGAACACGCTGCTTGGGATCGACATAAGTTCGACCTCCGTCAAGCTACTCGAATT
AAGTCGATCAGGCTCCCGGTATCGGGTTGAGTCATATGCGGTCGAGCCGCTGCCGGCAAACGCTGTGGTGGAAAAGAACA
TTGCCGAGCTGGAGGGCGTGGGGCAGGCGCTGTCGCGCTTGTTGACGAAGGCTAAAACCGGCGTCAAATCCGCCGCGGTG
GCGGTTTCCGGCTCTGCGGTCATTACCAAAAGCATCGAGATGGACGGCGGGCTGAGCGACGACGAGCTGGAAAATCAGCT
GAAAATCGAGGCTGATCAGTACATCCCGTACCCGCTCGAAGAGGTCGCCATCGATTTCGAGGTTCAGGGTCCCGCCGCGC
GGGCTCCTGGGCGCGTGGAGGTGCTGTTGGCTGCCTGTCGCAAGGAAAATGTCGAGATTCGCGAGGCGGCGCTTGCCTTG
GCCGGATTGACCGCCAAGATCGTCGACGTCGAAGCCTATGCATTAGAGCGCTCATATGGCTTGTTGGCGCCTCAGTTGGG
CGCCGGGCACGATGAGCTAACCGTTGCGCTCGTCGACATCGGCGCAACGATGACGACGCTGAGCGTGCTCCACAATGGCC
GCACTATCTATACCCGTGAACAACTGTTCGGAGGGCGTCAGCTCACCGAGGAGATCCAGCGGCGCTACGGGCTGTCGATG
GAGGAGGCTGGCCTGGCAAAAAAACAGGGAGGGCTCCCAGATGACTACGACAGCGAAGTGTTGCAACCGTTCAAGGAGGC
GGTGGTGCAGCAGGTGTCGCGCTCGTTGCAGTTCTTCTTCGCGGCTGGCCAGTTCCACGATGTGGATTACATCCTGCTTG
CCGGAGGGACCGCTTCGATTCCGGGGCTGGACCGTTTGATTCAGCAGAAAATCGGAACCCAGACTTTAGTTGCCAACCCG
TTTGCCGATATGGCCTTGAGTAGCAAGGTCAACGCTGGCGCGCTCGCCAGTGACGCGCCGTCCCTGATGATCGCCTGCGG
ATTGGCCTTGAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	57.062	100	0.571
pilM	Acinetobacter baumannii D1279779	57.062	100	0.571
comM	Acinetobacter baylyi ADP1	54.237	100	0.542
pilM	Legionella pneumophila strain ERS1305867	47.458	100	0.475