Detailed information NTG0557845

Bioinformatically predicted

Overview

• Name: comYF
• Type: Machinery gene
• Locus tag: INT76_RS06205
• Genome accession: NZ_CP073084
• Coordinates: 1227502..1227936 (-)
• Length: 144 a.a.
• NCBI ID: WP_212573034.1
• Uniprot ID: -
• Organism: Streptococcus oriscaviae strain HKU75
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1222502..1232936

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
INT76_RS06180 (INT76_06180)	-	1222681..1223922 (-)	1242	WP_212569655.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-
INT76_RS06185 (INT76_06185)	-	1223982..1224536 (-)	555	WP_212569656.1	folate family ECF transporter S component	-
INT76_RS06190 (INT76_06190)	-	1224840..1226027 (-)	1188	WP_212569657.1	acetate kinase	-
INT76_RS06195 (INT76_06195)	comYH	1226086..1227030 (-)	945	WP_212569658.1	class I SAM-dependent methyltransferase	Machinery gene
INT76_RS06200 (INT76_06200)	comGG	1227105..1227524 (-)	420	WP_212569659.1	competence type IV pilus minor pilin ComGG	-
INT76_RS06205 (INT76_06205)	comYF	1227502..1227936 (-)	435	WP_212573034.1	competence type IV pilus minor pilin ComGF	Machinery gene
INT76_RS06210 (INT76_06210)	comYE	1227923..1228216 (-)	294	WP_212569660.1	competence type IV pilus minor pilin ComGE	Machinery gene
INT76_RS06215 (INT76_06215)	comGD/cglD	1228188..1228616 (-)	429	WP_212573035.1	competence type IV pilus minor pilin ComGD	Machinery gene
INT76_RS06220 (INT76_06220)	comGC/cglC	1228576..1228890 (-)	315	WP_212569661.1	competence type IV pilus major pilin ComGC	Machinery gene
INT76_RS06225 (INT76_06225)	comYB	1228892..1229929 (-)	1038	WP_282960473.1	competence type IV pilus assembly protein ComGB	Machinery gene
INT76_RS06230 (INT76_06230)	comGA/cglA/cilD	1229841..1230791 (-)	951	WP_212569662.1	competence type IV pilus ATPase ComGA	Machinery gene
INT76_RS06235 (INT76_06235)	-	1230879..1231847 (+)	969	WP_212569663.1	S66 peptidase family protein	-
INT76_RS06240 (INT76_06240)	-	1231866..1232225 (-)	360	WP_212569664.1	DUF1033 family protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16434.78 Da
• Isoelectric Point: 8.0141

>NTDB_id=557845 INT76_RS06205 WP_212573034.1 1227502..1227936(-) (comYF) [Streptococcus oriscaviae strain HKU75]
MKKTRVAAFTLMECLLALLVLSGSFLVFDGLTKLVSQEVRHQTSSVDRDWLVFAEQLRTEFDGVSLLKVENNRIYVDKDG
QLLAFGKSKGDDFRKTNDKGQGYQPMLYHLQSVQISQSDGLVRIDLTFQNGKRRTFLYDFTEAS

Nucleotide

• Length: 435 bp

>NTDB_id=557845 INT76_RS06205 WP_212573034.1 1227502..1227936(-) (comYF) [Streptococcus oriscaviae strain HKU75]
TTGAAAAAGACTAGGGTGGCAGCGTTTACCCTGATGGAATGCTTGTTGGCCTTACTCGTCCTCTCTGGCAGTTTCTTGGT
GTTTGATGGTTTGACCAAGTTGGTCAGTCAAGAAGTTCGCCATCAGACAAGCAGTGTGGATAGGGACTGGTTGGTATTTG
CGGAGCAGCTACGGACGGAGTTTGATGGGGTGTCGCTCCTAAAGGTAGAAAATAATCGAATCTATGTGGATAAGGATGGT
CAGCTACTTGCTTTTGGCAAGTCTAAGGGAGATGATTTTAGAAAGACCAATGACAAGGGTCAGGGTTACCAGCCCATGCT
CTACCATCTTCAGTCTGTTCAAATCAGCCAGTCGGATGGATTGGTGCGCATCGATTTGACCTTTCAGAACGGCAAGCGGA
GGACATTTCTTTATGATTTTACAGAAGCGAGTTAG

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (36-133)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYF	Streptococcus mutans UA140	49.296	98.611	0.486
comYF	Streptococcus mutans UA159	48.592	98.611	0.479
comGF/cglF	Streptococcus pneumoniae R6	50.365	95.139	0.479
comGF/cglF	Streptococcus pneumoniae TIGR4	50.365	95.139	0.479
comGF/cglF	Streptococcus pneumoniae Rx1	50.365	95.139	0.479
comGF/cglF	Streptococcus pneumoniae D39	50.365	95.139	0.479
comGF/cglF	Streptococcus mitis SK321	47.183	98.611	0.465
comGF/cglF	Streptococcus mitis NCTC 12261	47.183	98.611	0.465
comGF	Lactococcus lactis subsp. cremoris KW2	46.809	97.917	0.458