Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   LUU82_RS01160 Genome accession   NZ_CP089586
Coordinates   179439..180179 (+) Length   246 a.a.
NCBI ID   WP_000216879.1    Uniprot ID   -
Organism   Staphylococcus aureus strain E1185_IV_ST12     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 174439..185179
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LUU82_RS01135 (LUU82_01135) yhaM 174857..175798 (+) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -
  LUU82_RS01140 (LUU82_01140) - 175919..176881 (-) 963 WP_000782127.1 foldase protein PrsA -
  LUU82_RS01145 (LUU82_01145) - 177086..177643 (-) 558 WP_000477954.1 DUF3267 domain-containing protein -
  LUU82_RS01150 (LUU82_01150) - 178376..178741 (-) 366 WP_000648118.1 YtxH domain-containing protein -
  LUU82_RS01155 (LUU82_01155) - 178883..179305 (-) 423 WP_000004981.1 HIT family protein -
  LUU82_RS01160 (LUU82_01160) pptA 179439..180179 (+) 741 WP_000216879.1 ABC transporter ATP-binding protein EcsA Regulator
  LUU82_RS01165 (LUU82_01165) ecsB 180172..181395 (+) 1224 WP_000551841.1 ABC transporter permease EcsB -
  LUU82_RS01170 (LUU82_01170) traP 181519..182022 (-) 504 WP_000737976.1 signal transduction protein TRAP -
  LUU82_RS01175 (LUU82_01175) - 182185..182295 (+) 111 WP_001790154.1 hypothetical protein -
  LUU82_RS01180 (LUU82_01180) hemE 182285..183322 (+) 1038 WP_000233526.1 uroporphyrinogen decarboxylase -
  LUU82_RS01185 (LUU82_01185) hemH 183380..184303 (+) 924 WP_000162886.1 ferrochelatase -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27715.11 Da        Isoelectric Point: 4.7504

>NTDB_id=552045 LUU82_RS01160 WP_000216879.1 179439..180179(+) (pptA) [Staphylococcus aureus strain E1185_IV_ST12]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDREEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHKQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=552045 LUU82_RS01160 WP_000216879.1 179439..180179(+) (pptA) [Staphylococcus aureus strain E1185_IV_ST12]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATCGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGAAGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGCCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTATTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAAACAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545