Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   J5M87_RS09760 Genome accession   NZ_CP072115
Coordinates   2090419..2091636 (+) Length   405 a.a.
NCBI ID   WP_375138169.1    Uniprot ID   -
Organism   Streptococcus zhangguiae strain zg-86     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2085419..2096636
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J5M87_RS09730 (J5M87_09730) - 2085873..2088443 (+) 2571 WP_154607653.1 YfhO family protein -
  J5M87_RS09750 (J5M87_09750) - 2089091..2089762 (-) 672 WP_154607654.1 YoaK family protein -
  J5M87_RS09755 (J5M87_09755) rlmH 2089795..2090274 (-) 480 WP_154607655.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  J5M87_RS09760 (J5M87_09760) htrA 2090419..2091636 (+) 1218 WP_375138169.1 S1C family serine protease Regulator
  J5M87_RS09765 (J5M87_09765) spo0J 2091694..2092458 (+) 765 WP_154607657.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 405 a.a.        Molecular weight: 42775.07 Da        Isoelectric Point: 4.8959

>NTDB_id=550561 J5M87_RS09760 WP_375138169.1 2090419..2091636(+) (htrA) [Streptococcus zhangguiae strain zg-86]
MEETICMKKTVNYLLILVIGFVGGLAGTLVAPLLHPTNQPNQVVETKKDNEQTTVSNVQYDNQNSTTTAVEKVQNAVVSV
INYQKARDNGYRSILGSNETNDELAVAGEGSGVIYKKTDQFAYLVTNTHVIAGAEKIDIQLASGEKVEGELIGSDTYADI
AVIKIAADKVKNVAEFANSDKIKVGETAIAIGSPLGSIYANTVTQGIVSSLSRTVTSKAEDGQTISTNAIQTDTAINPGN
SGGPLINIQGQVIGITSSKITSSSNSAAGVAVEGMGFAIPANDAVNIINQLEKNGKVIRPALGIQMVNLSNLSTEQRKKA
GLDSDTVKTGIVVVSTQQGLPADGQLKQYDVITKIDGEKVETTSDLQSALYKHTVGDTISITYSRNGKEKTIDIKLTHST
EDLSN

Nucleotide


Download         Length: 1218 bp        

>NTDB_id=550561 J5M87_RS09760 WP_375138169.1 2090419..2091636(+) (htrA) [Streptococcus zhangguiae strain zg-86]
TTGGAGGAAACTATCTGCATGAAAAAAACTGTAAACTATCTACTCATACTCGTAATTGGATTTGTTGGAGGCTTAGCAGG
AACTCTTGTCGCTCCTTTACTTCATCCAACAAATCAACCGAATCAAGTTGTAGAAACAAAAAAAGATAATGAACAGACTA
CTGTAAGTAATGTCCAATATGATAATCAAAATTCAACAACAACAGCCGTTGAAAAAGTTCAAAATGCAGTCGTATCTGTC
ATTAATTATCAAAAAGCGCGTGACAATGGCTATCGCTCCATACTGGGAAGCAATGAAACAAATGATGAACTAGCTGTTGC
GGGCGAGGGGTCTGGTGTTATCTATAAGAAAACAGATCAATTTGCCTATCTTGTCACTAACACTCATGTCATCGCAGGGG
CTGAAAAAATCGATATTCAACTTGCTTCTGGTGAAAAAGTGGAAGGTGAGTTAATTGGATCAGATACCTATGCCGATATA
GCCGTTATCAAAATTGCTGCTGATAAGGTGAAAAATGTTGCTGAATTTGCGAACTCTGATAAAATAAAAGTTGGAGAAAC
AGCCATTGCTATTGGTAGTCCGCTTGGTAGTATTTATGCCAATACTGTCACTCAAGGGATCGTTTCCAGTCTTAGCCGTA
CAGTTACTTCAAAAGCAGAAGACGGTCAAACGATTTCAACTAATGCTATTCAGACAGATACCGCTATTAACCCGGGTAAT
TCAGGTGGCCCACTAATCAATATTCAAGGACAAGTTATTGGTATTACCTCTAGCAAAATCACTTCTAGTTCCAATTCTGC
AGCAGGAGTCGCTGTAGAAGGAATGGGATTTGCAATTCCAGCAAATGATGCTGTCAATATCATCAATCAACTAGAGAAAA
ATGGGAAAGTCATTCGTCCAGCACTCGGCATTCAAATGGTGAATTTAAGTAATTTATCAACTGAGCAACGGAAAAAAGCT
GGTCTTGATAGCGATACAGTGAAAACAGGTATTGTCGTTGTCTCTACTCAACAAGGTTTACCAGCAGATGGACAACTCAA
ACAATACGATGTCATTACAAAAATTGACGGAGAAAAGGTTGAAACAACCAGTGACCTCCAAAGTGCACTTTACAAGCATA
CTGTCGGTGATACTATCTCTATTACTTATTCTCGTAATGGAAAAGAAAAAACTATTGACATCAAATTGACACATTCAACA
GAAGATTTATCAAACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus gordonii str. Challis substr. CH1

61.194

99.259

0.607

  htrA Streptococcus mutans UA159

61.013

97.531

0.595

  htrA Streptococcus mitis NCTC 12261

58.942

98.025

0.578

  htrA Streptococcus pneumoniae Rx1

58.69

98.025

0.575

  htrA Streptococcus pneumoniae D39

58.69

98.025

0.575

  htrA Streptococcus pneumoniae R6

58.69

98.025

0.575

  htrA Streptococcus pneumoniae TIGR4

58.69

98.025

0.575