Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   EFS1_RS12665 Genome accession   NC_019770
Coordinates   2515377..2516675 (+) Length   432 a.a.
NCBI ID   WP_010709051.1    Uniprot ID   -
Organism   Enterococcus faecalis str. Symbioflor     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2510377..2521675
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EFS1_RS12660 (EFS1_2469) rlmH 2514497..2514976 (-) 480 WP_002355021.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  EFS1_RS12665 (EFS1_2470) htrA 2515377..2516675 (+) 1299 WP_010709051.1 S1C family serine protease Regulator
  EFS1_RS12670 (EFS1_2471) ytpR 2516722..2517342 (-) 621 WP_002361057.1 YtpR family tRNA-binding protein -
  EFS1_RS12675 (EFS1_2472) - 2517553..2518008 (-) 456 WP_002385249.1 universal stress protein -
  EFS1_RS12680 (EFS1_2473) - 2518156..2518470 (-) 315 WP_002355015.1 thioredoxin family protein -
  EFS1_RS12685 (EFS1_2474) pepA 2518482..2519558 (-) 1077 WP_002389404.1 glutamyl aminopeptidase -
  EFS1_RS12690 (EFS1_2475) - 2519865..2520206 (+) 342 WP_002355012.1 PepSY domain-containing protein -

Sequence


Protein


Download         Length: 432 a.a.        Molecular weight: 44830.97 Da        Isoelectric Point: 5.1142

>NTDB_id=55003 EFS1_RS12665 WP_010709051.1 2515377..2516675(+) (htrA) [Enterococcus faecalis str. Symbioflor]
MQRKDVTPNSDKKSLLQKFGIGLAGGLLGGALILGGAYSGIIPTPNGGNNAATTTSTNHGDTKVSNVSYNVSSDVTKAVK
KVQNSVVSVINMQSASNNSSADDPFGGLFGGNEGTQDSSGNNGNDLEAASEGSGVIYKKDGKTAYVVTNNHVVDKAQGLE
VVLSDGTKVKGELVGTDAYTDLAVIKISSDKVDQVAEFGNSSKITVGEPAIAIGSPLGSDYANSVTQGIISSVNRNITNK
NESGETININAIQTDAAINPGNSGGPLINIQGQVIGINSVKIVQSTSQVSVEGMGFAIPSNDVVNIINQLEKDGKVTRPA
LGITMSDLTGISSQQQEQILKIPASVKTGVVVRGVEAATPAEKAGLEKYDVITKVDGQDVSSTTDLQSALYKKKVGDKME
VTYYRGSKEMKATIDLTIDKSALTQQNNRSNQ

Nucleotide


Download         Length: 1299 bp        

>NTDB_id=55003 EFS1_RS12665 WP_010709051.1 2515377..2516675(+) (htrA) [Enterococcus faecalis str. Symbioflor]
ATGCAACGAAAAGATGTTACACCTAATTCAGATAAAAAAAGTTTATTGCAAAAATTTGGGATTGGTTTAGCTGGCGGCTT
ACTTGGTGGCGCCCTTATTCTAGGAGGCGCTTATTCTGGGATTATTCCCACACCCAACGGCGGAAATAATGCGGCGACGA
CGACATCCACTAATCACGGCGACACAAAAGTCAGCAATGTAAGTTACAATGTGTCTAGCGATGTCACAAAAGCCGTGAAA
AAAGTTCAAAATTCTGTGGTTTCTGTCATTAATATGCAAAGTGCTAGCAACAATTCTTCGGCAGATGATCCTTTTGGGGG
ATTGTTCGGTGGGAATGAAGGTACTCAAGACTCTTCCGGCAACAATGGTAACGATTTAGAAGCAGCCAGTGAAGGTAGTG
GGGTTATTTATAAGAAAGATGGTAAAACGGCTTATGTCGTGACAAATAACCACGTCGTAGATAAAGCGCAAGGATTGGAA
GTTGTTTTATCTGATGGTACCAAAGTGAAAGGCGAATTAGTCGGAACCGATGCTTACACGGATTTAGCCGTGATTAAAAT
TTCTTCCGACAAAGTTGATCAAGTCGCTGAGTTTGGAAATTCTAGTAAAATCACAGTCGGTGAGCCTGCTATTGCAATTG
GTTCCCCTCTAGGCTCTGATTATGCTAACTCTGTCACACAAGGAATCATCTCTTCTGTGAATAGAAATATTACCAATAAA
AACGAGTCTGGTGAAACCATCAATATTAATGCCATTCAAACCGATGCTGCCATCAATCCAGGAAACTCTGGTGGTCCACT
AATCAATATTCAAGGACAAGTCATTGGAATTAACTCAGTAAAAATTGTGCAATCAACTAGTCAAGTGAGCGTTGAAGGGA
TGGGCTTTGCCATTCCAAGTAATGACGTAGTCAACATTATCAACCAATTAGAAAAAGATGGTAAAGTGACGCGGCCAGCT
CTCGGGATTACGATGTCTGATTTAACAGGTATCTCTTCACAACAACAAGAACAAATTTTAAAAATTCCAGCTTCTGTAAA
AACTGGCGTAGTGGTTCGTGGTGTTGAAGCAGCGACCCCTGCTGAAAAGGCTGGATTGGAAAAATACGATGTTATCACGA
AAGTTGACGGCCAAGACGTAAGCTCTACTACAGATTTACAAAGCGCGCTTTACAAGAAAAAAGTTGGCGACAAAATGGAA
GTGACTTATTATCGTGGTTCTAAAGAAATGAAAGCAACTATCGATTTAACCATTGATAAATCAGCTTTAACACAACAAAA
TAATCGCAGCAATCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus gordonii str. Challis substr. CH1

53.415

94.907

0.507

  htrA Streptococcus mutans UA159

58.63

84.491

0.495

  htrA Streptococcus mitis NCTC 12261

55.405

85.648

0.475

  htrA Streptococcus pneumoniae TIGR4

56.091

81.713

0.458

  htrA Streptococcus pneumoniae Rx1

56.091

81.713

0.458

  htrA Streptococcus pneumoniae D39

56.091

81.713

0.458

  htrA Streptococcus pneumoniae R6

56.091

81.713

0.458


Multiple sequence alignment