Detailed information NTG0547940

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: JZ789_RS00810
• Genome accession: NZ_CP071806
• Coordinates: 130465..130899 (+)
• Length: 144 a.a.
• NCBI ID: WP_063725150.1
• Uniprot ID: -
• Organism: Streptococcus suis strain GX69
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 125465..135899

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JZ789_RS00775 (JZ789_00775)	-	126207..126572 (+)	366	WP_024417409.1	DUF1033 family protein	-
JZ789_RS00780 (JZ789_00780)	-	126607..127557 (-)	951	WP_170244797.1	S66 peptidase family protein	-
JZ789_RS00785 (JZ789_00785)	comYA	127643..128593 (+)	951	WP_024417411.1	competence type IV pilus ATPase ComGA	Machinery gene
JZ789_RS00790 (JZ789_00790)	comYB	128505..129542 (+)	1038	WP_255195823.1	competence type IV pilus assembly protein ComGB	Machinery gene
JZ789_RS00795 (JZ789_00795)	comYC	129544..129825 (+)	282	WP_009909092.1	competence type IV pilus major pilin ComGC	Machinery gene
JZ789_RS00800 (JZ789_00800)	comGD	129806..130213 (+)	408	WP_024387070.1	competence type IV pilus minor pilin ComGD	-
JZ789_RS00805 (JZ789_00805)	comYE	130185..130478 (+)	294	WP_024390433.1	competence type IV pilus minor pilin ComGE	Machinery gene
JZ789_RS00810 (JZ789_00810)	comGF/cglF	130465..130899 (+)	435	WP_063725150.1	competence type IV pilus minor pilin ComGF	Machinery gene
JZ789_RS00815 (JZ789_00815)	comGG	130877..131287 (+)	411	WP_009909099.1	competence type IV pilus minor pilin ComGG	-
JZ789_RS00820 (JZ789_00820)	comYH	131344..132297 (+)	954	WP_024409299.1	class I SAM-dependent methyltransferase	Machinery gene
JZ789_RS00825 (JZ789_00825)	-	132347..133534 (+)	1188	WP_014637319.1	acetate kinase	-
JZ789_RS00830 (JZ789_00830)	-	133849..134400 (+)	552	WP_024417413.1	folate family ECF transporter S component	-
JZ789_RS00835 (JZ789_00835)	-	134456..135712 (+)	1257	WP_024417414.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16420.77 Da
• Isoelectric Point: 6.9834

>NTDB_id=547940 JZ789_RS00810 WP_063725150.1 130465..130899(+) (comGF/cglF) [Streptococcus suis strain GX69]
MLKSKIPAFTLLECLVALVILSGSLLVFEGLSKLLVQEAHYQGQTVQKEWLVFSSQLRSEWDQAELVKVENGKVYVDKDG
QALAFGKSRSDDFRKTNDRGQGYQPMLYQVDSAAISQEKQLVRIDFSFKNGEERTFIYAFKEKS

Nucleotide

• Length: 435 bp

>NTDB_id=547940 JZ789_RS00810 WP_063725150.1 130465..130899(+) (comGF/cglF) [Streptococcus suis strain GX69]
TTGTTAAAAAGTAAAATTCCTGCTTTTACTCTCTTGGAATGCTTGGTAGCCTTAGTCATCCTTTCAGGTAGTCTTCTGGT
CTTTGAAGGCTTGTCAAAACTGCTGGTCCAAGAAGCGCATTATCAAGGTCAGACCGTTCAAAAGGAATGGTTGGTCTTCT
CTAGCCAATTGCGGTCGGAGTGGGACCAGGCTGAATTGGTCAAGGTTGAAAATGGCAAGGTCTATGTCGATAAGGATGGA
CAAGCATTAGCCTTTGGCAAGTCACGGTCGGATGATTTTCGGAAAACAAATGACAGGGGACAGGGTTACCAGCCCATGCT
CTATCAGGTGGATAGCGCAGCCATTTCCCAAGAAAAGCAGCTGGTGCGCATCGACTTTAGCTTTAAAAACGGAGAGGAGC
GGACCTTTATCTATGCTTTTAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (37-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae TIGR4	53.901	97.917	0.528
comGF/cglF	Streptococcus pneumoniae Rx1	53.901	97.917	0.528
comGF/cglF	Streptococcus pneumoniae D39	53.901	97.917	0.528
comGF/cglF	Streptococcus pneumoniae R6	53.901	97.917	0.528
comGF/cglF	Streptococcus mitis NCTC 12261	54.478	93.056	0.507
comYF	Streptococcus mutans UA140	50	100	0.5
comYF	Streptococcus mutans UA159	49.306	100	0.493
comGF/cglF	Streptococcus mitis SK321	51.493	93.056	0.479
comGF	Lactococcus lactis subsp. cremoris KW2	47.518	97.917	0.465