Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | JZ789_RS00820 | Genome accession | NZ_CP071806 |
| Coordinates | 131344..132297 (+) | Length | 317 a.a. |
| NCBI ID | WP_024409299.1 | Uniprot ID | A0A7Y6VE95 |
| Organism | Streptococcus suis strain GX69 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 126344..137297
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JZ789_RS00780 (JZ789_00780) | - | 126607..127557 (-) | 951 | WP_170244797.1 | S66 peptidase family protein | - |
| JZ789_RS00785 (JZ789_00785) | comYA | 127643..128593 (+) | 951 | WP_024417411.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| JZ789_RS00790 (JZ789_00790) | comYB | 128505..129542 (+) | 1038 | WP_255195823.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| JZ789_RS00795 (JZ789_00795) | comYC | 129544..129825 (+) | 282 | WP_009909092.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| JZ789_RS00800 (JZ789_00800) | comGD | 129806..130213 (+) | 408 | WP_024387070.1 | competence type IV pilus minor pilin ComGD | - |
| JZ789_RS00805 (JZ789_00805) | comYE | 130185..130478 (+) | 294 | WP_024390433.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| JZ789_RS00810 (JZ789_00810) | comGF/cglF | 130465..130899 (+) | 435 | WP_063725150.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| JZ789_RS00815 (JZ789_00815) | comGG | 130877..131287 (+) | 411 | WP_009909099.1 | competence type IV pilus minor pilin ComGG | - |
| JZ789_RS00820 (JZ789_00820) | comYH | 131344..132297 (+) | 954 | WP_024409299.1 | class I SAM-dependent methyltransferase | Machinery gene |
| JZ789_RS00825 (JZ789_00825) | - | 132347..133534 (+) | 1188 | WP_014637319.1 | acetate kinase | - |
| JZ789_RS00830 (JZ789_00830) | - | 133849..134400 (+) | 552 | WP_024417413.1 | folate family ECF transporter S component | - |
| JZ789_RS00835 (JZ789_00835) | - | 134456..135712 (+) | 1257 | WP_024417414.1 | folylpolyglutamate synthase/dihydrofolate synthase family protein | - |
| JZ789_RS00840 (JZ789_00840) | pepA | 135758..136819 (-) | 1062 | WP_002936538.1 | glutamyl aminopeptidase | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35807.97 Da Isoelectric Point: 4.4571
>NTDB_id=547941 JZ789_RS00820 WP_024409299.1 131344..132297(+) (comYH) [Streptococcus suis strain GX69]
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVANQHEMDLVVNNNKTLKQLDLTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLMPTQKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPNEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARSLTPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVANQHEMDLVVNNNKTLKQLDLTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLMPTQKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPNEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARSLTPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI
Nucleotide
Download Length: 954 bp
>NTDB_id=547941 JZ789_RS00820 WP_024409299.1 131344..132297(+) (comYH) [Streptococcus suis strain GX69]
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGTACCAA
TATCTATGATGCCATGATTGAGCAAAATGCTGCTTACGTAGCTAATCAGCATGAGATGGACCTTGTTGTCAATAATAACA
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTATCAATTCTTGCTCATCAAGGCCAATCAGACT
GAACCCATGCAGTACAATCACCAGTTCACACCAGACTCTATCGGATTTATCCTATCTTTTCTAGTAGACCAATTGATGCC
GACTCAAAAGGTGACGGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACCATTCTCAACGCCAGCCAGAAAG
AATTGGATTACTTGGGGATCGAAGTGGACGACCTCTTGATTGATTTGTCGGCAAGTATTGCGGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGAGATGCGGTACGTCCGCAGATTTTGAAGGAAAGTCAAGTAATTTTGGGAGATTTGCCTATTGG
CTACTATCCAGATGACCAGATTGCTAGCCGCTATCAGGTCGCCAGCCCAAATGAACATACCTACGCCCATCATTTACTCA
TGGAACAATCCCTGAAATATCTGGAAAAAGATGGCTTTGCGATTTTGTTGGCTCCAAATGATTTATTGACTAGTCCGCAA
AGCGATTTGCTGAAAGGTTGGTTACAGGAGCAAGCCAATATTGTTGCCATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGATCGTTGACGCCGTTTGTTTATCCCTTACAAA
GTCTTCAAGAACCAGAAGCTATTCAGAAGTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGTACCAA
TATCTATGATGCCATGATTGAGCAAAATGCTGCTTACGTAGCTAATCAGCATGAGATGGACCTTGTTGTCAATAATAACA
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTATCAATTCTTGCTCATCAAGGCCAATCAGACT
GAACCCATGCAGTACAATCACCAGTTCACACCAGACTCTATCGGATTTATCCTATCTTTTCTAGTAGACCAATTGATGCC
GACTCAAAAGGTGACGGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACCATTCTCAACGCCAGCCAGAAAG
AATTGGATTACTTGGGGATCGAAGTGGACGACCTCTTGATTGATTTGTCGGCAAGTATTGCGGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGAGATGCGGTACGTCCGCAGATTTTGAAGGAAAGTCAAGTAATTTTGGGAGATTTGCCTATTGG
CTACTATCCAGATGACCAGATTGCTAGCCGCTATCAGGTCGCCAGCCCAAATGAACATACCTACGCCCATCATTTACTCA
TGGAACAATCCCTGAAATATCTGGAAAAAGATGGCTTTGCGATTTTGTTGGCTCCAAATGATTTATTGACTAGTCCGCAA
AGCGATTTGCTGAAAGGTTGGTTACAGGAGCAAGCCAATATTGTTGCCATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGATCGTTGACGCCGTTTGTTTATCCCTTACAAA
GTCTTCAAGAACCAGAAGCTATTCAGAAGTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
60.759 |
99.685 |
0.606 |
| comYH | Streptococcus mutans UA159 |
60.443 |
99.685 |
0.603 |