Detailed information NTG0544254

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: LPB19_RS06775
• Genome accession: NZ_CP071247
• Coordinates: 1488375..1489439 (+)
• Length: 354 a.a.
• NCBI ID: WP_206645313.1
• Uniprot ID: -
• Organism: Marinobacter salinisoli strain LPB0319
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1483375..1494439

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LPB19_RS06760 (LPB19_06760)	rpmE	1483874..1484095 (+)	222	WP_206645310.1	50S ribosomal protein L31	-
LPB19_RS06765 (LPB19_06765)	-	1484318..1485583 (+)	1266	WP_206645311.1	malic enzyme-like NAD(P)-binding protein	-
LPB19_RS06770 (LPB19_06770)	-	1485652..1488180 (-)	2529	WP_206645312.1	penicillin-binding protein 1A	-
LPB19_RS06775 (LPB19_06775)	pilM	1488375..1489439 (+)	1065	WP_206645313.1	pilus assembly protein PilM	Machinery gene
LPB19_RS06780 (LPB19_06780)	-	1489439..1490002 (+)	564	WP_206645314.1	PilN domain-containing protein	-
LPB19_RS06785 (LPB19_06785)	-	1490002..1490613 (+)	612	WP_206645315.1	type 4a pilus biogenesis protein PilO	-
LPB19_RS06790 (LPB19_06790)	-	1490616..1491164 (+)	549	WP_206645316.1	pilus assembly protein PilP	-
LPB19_RS06795 (LPB19_06795)	pilQ	1491230..1493290 (+)	2061	WP_206645317.1	type IV pilus secretin PilQ	Machinery gene
LPB19_RS06800 (LPB19_06800)	aroK	1493431..1493997 (+)	567	WP_206645318.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37869.87 Da
• Isoelectric Point: 4.1119

>NTDB_id=544254 LPB19_RS06775 WP_206645313.1 1488375..1489439(+) (pilM) [Marinobacter salinisoli strain LPB0319]
MFGLFGSKSSAVLGVDVSSSSVKLLELSKQGDRFKVESYAVEPLPANAVVEKNITDVEAVGEALKKVASKSRTGVKQVAV
AVSGSAVITKIIQMDVGLNEFEMEDQIALEADQYIPYPLDEVAIDFEVQGVSETNPDQVDVLLAACRKENVDIREDALEI
AALSTKVVDVEAYALERAYSLLESQLESQGEELVVAIVDIGATMTTLSVLAGGRTVYTREQIFGGKQLTEEIQRRYGLSQ
EEAGLAKKQGGLPDDYEAEVLSPFRDAVVQQVARALQFFFGASQYNAVDYVVLAGGTASIQGLTEMVEEKTATPTLVANP
FADMAVGSKVNASTLSNDAPSLMIACGLAMRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=544254 LPB19_RS06775 WP_206645313.1 1488375..1489439(+) (pilM) [Marinobacter salinisoli strain LPB0319]
GTGTTCGGATTGTTTGGAAGTAAATCCAGTGCAGTACTGGGCGTGGATGTCAGTTCAAGTTCAGTCAAACTTCTGGAACT
GTCAAAGCAAGGTGACCGTTTCAAGGTCGAAAGTTACGCAGTCGAGCCGTTGCCGGCAAACGCTGTTGTAGAAAAAAACA
TCACTGACGTTGAGGCCGTTGGCGAAGCGCTGAAAAAAGTGGCGTCCAAGTCACGTACCGGGGTGAAGCAGGTTGCCGTT
GCCGTGTCGGGATCTGCCGTTATCACCAAGATCATTCAGATGGATGTCGGTCTTAACGAGTTCGAAATGGAAGATCAGAT
CGCCCTCGAGGCCGATCAATACATTCCTTATCCCCTCGATGAAGTTGCCATTGACTTTGAAGTTCAGGGCGTCTCGGAAA
CCAACCCCGATCAAGTTGACGTGCTTCTGGCTGCTTGCAGGAAGGAAAACGTCGATATTCGCGAAGACGCGCTCGAGATT
GCTGCGCTGTCTACGAAAGTTGTCGATGTTGAAGCCTACGCCCTGGAGCGCGCTTACTCTCTGCTCGAGTCCCAGCTCGA
ATCGCAGGGCGAAGAGCTGGTGGTTGCCATCGTCGATATCGGTGCAACCATGACAACGCTCAGTGTCCTTGCCGGAGGGC
GGACAGTTTACACCCGCGAGCAGATTTTCGGTGGCAAGCAGCTGACCGAGGAAATTCAGCGTCGATACGGGTTGTCGCAG
GAAGAGGCGGGTCTGGCGAAAAAGCAGGGTGGCTTACCGGATGATTATGAGGCTGAAGTATTGAGCCCGTTCAGGGATGC
GGTTGTCCAGCAGGTCGCCCGGGCGCTTCAGTTCTTTTTCGGCGCCAGCCAATACAATGCGGTCGACTATGTGGTTCTGG
CAGGTGGTACTGCCTCGATTCAGGGGCTAACAGAGATGGTCGAAGAGAAGACGGCAACGCCTACGCTGGTTGCAAATCCG
TTTGCGGACATGGCGGTAGGGTCCAAGGTCAATGCATCAACCCTCAGTAACGATGCTCCATCACTGATGATTGCCTGCGG
TTTGGCAATGAGGAGCTTTGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	52.825	100	0.528
comM	Acinetobacter nosocomialis M2	52.825	100	0.528
comM	Acinetobacter baylyi ADP1	50.565	100	0.506
pilM	Legionella pneumophila strain ERS1305867	45.763	100	0.458