Detailed information
Overview
| Name | vicR | Type | Regulator |
| Locus tag | JZI44_RS08295 | Genome accession | NZ_CP071148 |
| Coordinates | 1738950..1739660 (-) | Length | 236 a.a. |
| NCBI ID | WP_012515994.1 | Uniprot ID | - |
| Organism | Streptococcus equi subsp. equi strain 470_001 | ||
| Function | repress comCDE expression; repress comX expression (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1733950..1744660
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JZI44_RS08285 (JZI44_08285) | vicX | 1736792..1737601 (-) | 810 | WP_042357090.1 | MBL fold metallo-hydrolase | Regulator |
| JZI44_RS08290 (JZI44_08290) | vicK | 1737605..1738957 (-) | 1353 | WP_012679848.1 | cell wall metabolism sensor histidine kinase VicK | Regulator |
| JZI44_RS08295 (JZI44_08295) | vicR | 1738950..1739660 (-) | 711 | WP_012515994.1 | response regulator YycF | Regulator |
| JZI44_RS08300 (JZI44_08300) | - | 1739859..1740878 (-) | 1020 | WP_012679849.1 | DUF3114 domain-containing protein | - |
| JZI44_RS08305 (JZI44_08305) | - | 1740924..1742186 (-) | 1263 | WP_012679850.1 | AMP-binding protein | - |
| JZI44_RS08310 (JZI44_08310) | - | 1742176..1743291 (-) | 1116 | WP_012679851.1 | acetyl-CoA C-acyltransferase | - |
| JZI44_RS08315 (JZI44_08315) | - | 1743288..1743827 (-) | 540 | WP_042357092.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 236 a.a. Molecular weight: 26981.84 Da Isoelectric Point: 4.9038
>NTDB_id=543247 JZI44_RS08295 WP_012515994.1 1738950..1739660(-) (vicR) [Streptococcus equi subsp. equi strain 470_001]
MKKILIVDDEKPISDIIKFNLTKEGYDTVTAFDGKEAVAVFEEEKPDLIILDLMLPELDGLEVAKEIRKTSHIPIIMLSA
KDSEFDKVIGLEIGADDYVTKPFSNRELLARVKAHLRRTETIETAVAEENASSGSQELTIGNLQILPDAFIAKKHGQEVE
LTHREFELLHHLANHIGQVMTREHLLETVWGYDYFGDVRTVDVTIRRLREKIEDTPSRPEYILTRRGVGYYMKAYD
MKKILIVDDEKPISDIIKFNLTKEGYDTVTAFDGKEAVAVFEEEKPDLIILDLMLPELDGLEVAKEIRKTSHIPIIMLSA
KDSEFDKVIGLEIGADDYVTKPFSNRELLARVKAHLRRTETIETAVAEENASSGSQELTIGNLQILPDAFIAKKHGQEVE
LTHREFELLHHLANHIGQVMTREHLLETVWGYDYFGDVRTVDVTIRRLREKIEDTPSRPEYILTRRGVGYYMKAYD
Nucleotide
Download Length: 711 bp
>NTDB_id=543247 JZI44_RS08295 WP_012515994.1 1738950..1739660(-) (vicR) [Streptococcus equi subsp. equi strain 470_001]
ATGAAGAAAATACTGATTGTTGATGATGAAAAGCCGATTTCTGATATCATTAAATTTAATCTGACAAAGGAAGGCTATGA
TACGGTCACAGCATTTGATGGCAAAGAGGCCGTTGCAGTCTTTGAAGAGGAAAAGCCAGATTTGATTATTTTGGATTTGA
TGCTTCCTGAATTAGATGGCCTTGAGGTAGCCAAGGAAATCCGCAAGACCAGCCATATTCCTATCATCATGCTATCTGCT
AAGGATAGCGAATTTGATAAGGTGATTGGACTTGAAATAGGGGCCGATGATTATGTGACTAAGCCCTTTTCAAATCGTGA
GCTGCTGGCGCGTGTCAAGGCACATTTGCGTCGGACAGAGACTATTGAGACAGCAGTAGCCGAAGAAAATGCCTCCTCAG
GCTCTCAGGAGCTAACCATCGGCAATCTACAGATTTTACCAGATGCCTTTATCGCTAAAAAGCATGGTCAAGAGGTTGAG
CTGACCCATCGTGAGTTTGAATTGCTGCATCATCTGGCAAACCATATCGGACAGGTCATGACACGTGAGCATTTGCTTGA
GACCGTATGGGGCTACGATTATTTTGGCGATGTTCGAACCGTTGACGTTACTATCCGTCGCCTGCGCGAAAAAATAGAGG
ATACACCGAGTCGTCCAGAGTATATTTTGACAAGACGTGGTGTTGGGTACTACATGAAGGCTTATGACTAA
ATGAAGAAAATACTGATTGTTGATGATGAAAAGCCGATTTCTGATATCATTAAATTTAATCTGACAAAGGAAGGCTATGA
TACGGTCACAGCATTTGATGGCAAAGAGGCCGTTGCAGTCTTTGAAGAGGAAAAGCCAGATTTGATTATTTTGGATTTGA
TGCTTCCTGAATTAGATGGCCTTGAGGTAGCCAAGGAAATCCGCAAGACCAGCCATATTCCTATCATCATGCTATCTGCT
AAGGATAGCGAATTTGATAAGGTGATTGGACTTGAAATAGGGGCCGATGATTATGTGACTAAGCCCTTTTCAAATCGTGA
GCTGCTGGCGCGTGTCAAGGCACATTTGCGTCGGACAGAGACTATTGAGACAGCAGTAGCCGAAGAAAATGCCTCCTCAG
GCTCTCAGGAGCTAACCATCGGCAATCTACAGATTTTACCAGATGCCTTTATCGCTAAAAAGCATGGTCAAGAGGTTGAG
CTGACCCATCGTGAGTTTGAATTGCTGCATCATCTGGCAAACCATATCGGACAGGTCATGACACGTGAGCATTTGCTTGA
GACCGTATGGGGCTACGATTATTTTGGCGATGTTCGAACCGTTGACGTTACTATCCGTCGCCTGCGCGAAAAAATAGAGG
ATACACCGAGTCGTCCAGAGTATATTTTGACAAGACGTGGTGTTGGGTACTACATGAAGGCTTATGACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| vicR | Streptococcus mutans UA159 |
88.983 |
100 |
0.89 |
| micA | Streptococcus pneumoniae Cp1015 |
78.112 |
98.729 |
0.771 |
| covR | Lactococcus lactis subsp. lactis strain DGCC12653 |
44.828 |
98.305 |
0.441 |
| covR | Streptococcus salivarius strain HSISS4 |
44.397 |
98.305 |
0.436 |
| scnR | Streptococcus mutans UA159 |
38.034 |
99.153 |
0.377 |