Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   JZI59_RS05915 Genome accession   NZ_CP071144
Coordinates   1239185..1240408 (+) Length   407 a.a.
NCBI ID   WP_012516520.1    Uniprot ID   A0AAW3GJZ4
Organism   Streptococcus equi subsp. equi strain 470_008     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1234185..1245408
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JZI59_RS05890 (JZI59_05890) - 1234819..1237404 (+) 2586 WP_015898718.1 YfhO family protein -
  JZI59_RS05910 (JZI59_05910) rlmH 1238496..1238975 (-) 480 WP_012678751.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  JZI59_RS05915 (JZI59_05915) htrA 1239185..1240408 (+) 1224 WP_012516520.1 trypsin-like peptidase domain-containing protein Regulator
  JZI59_RS05920 (JZI59_05920) spo0J 1240528..1241301 (+) 774 WP_015898719.1 ParB/RepB/Spo0J family partition protein Regulator
  JZI59_RS05925 (JZI59_05925) dnaA 1241535..1242887 (+) 1353 WP_012678753.1 chromosomal replication initiator protein DnaA -
  JZI59_RS05930 (JZI59_05930) dnaN 1243044..1244180 (+) 1137 WP_012678754.1 DNA polymerase III subunit beta -
  JZI59_RS05935 (JZI59_05935) - 1244258..1244455 (+) 198 WP_012677176.1 DUF951 family protein -
  JZI59_RS05940 (JZI59_05940) - 1244579..1244941 (+) 363 WP_012678755.1 helix-turn-helix transcriptional regulator -

Sequence


Protein


Download         Length: 407 a.a.        Molecular weight: 42434.01 Da        Isoelectric Point: 5.4809

>NTDB_id=543116 JZI59_RS05915 WP_012516520.1 1239185..1240408(+) (htrA) [Streptococcus equi subsp. equi strain 470_008]
MLKSKNILKPLWVLAIGFLGGLLAALVVNGFSQNSLTSSNAKGATTTSNVSFNNTTDTTKAVKVVQDAVVSVINYQKAAS
PAISNPYINLFGEENDTSAVQKEDELSIHSEGSGVVYKKEGNTAYLVTNNHVIEGAQRIEILTADGSKIVGELVGADTYS
DLAVVKVAADKIKTIAKFADSTKINVGEVAIAIGSPLGTKYANSVTEGIVSSLSRTVTSRNEAGETISTNAIQTDAAINP
GNSGGPLINIEGQVIGINSSKISSTPTGSGGAIEGIGFAIPSSDVVTIINQLESNGAVIRPALGITMVNLSNLSTNALIQ
LNIPTSVTSGVVVASTQDGMPALGKLEQYDVITEVDGKEVSSISDLQSVLYSHEINDTIKVTFYRGTAKKKVDIKLTKTT
KDLTKKQ

Nucleotide


Download         Length: 1224 bp        

>NTDB_id=543116 JZI59_RS05915 WP_012516520.1 1239185..1240408(+) (htrA) [Streptococcus equi subsp. equi strain 470_008]
GTGTTAAAATCAAAAAATATATTGAAGCCCTTATGGGTTTTAGCCATTGGATTTTTAGGGGGCTTATTAGCTGCCTTAGT
TGTTAATGGATTTAGTCAGAATTCTCTAACATCTTCAAATGCAAAGGGAGCAACGACAACAAGCAACGTCAGCTTTAATA
ATACAACTGATACAACAAAGGCTGTTAAGGTGGTTCAAGATGCTGTAGTGTCTGTTATTAACTATCAAAAGGCTGCTTCG
CCTGCCATTTCAAATCCTTACATCAATCTTTTCGGAGAAGAAAATGATACCTCAGCAGTACAAAAAGAGGACGAGCTAAG
CATACACAGTGAAGGTTCGGGTGTTGTCTACAAAAAAGAAGGTAATACTGCTTATCTTGTAACCAACAATCATGTTATTG
AGGGAGCTCAACGAATTGAAATTTTAACAGCAGACGGCTCTAAGATCGTTGGAGAACTAGTTGGTGCAGACACTTATTCT
GACCTAGCTGTTGTCAAAGTTGCTGCTGATAAAATCAAAACAATAGCCAAATTTGCAGATTCAACCAAAATTAATGTTGG
AGAGGTAGCCATTGCAATTGGTAGTCCTCTTGGAACAAAATATGCCAACTCAGTGACAGAAGGGATTGTTTCAAGTCTAA
GCCGTACAGTCACTTCAAGAAATGAGGCAGGCGAGACCATCTCAACAAATGCTATCCAAACTGATGCTGCTATCAATCCA
GGTAATTCAGGTGGACCACTCATCAATATTGAAGGCCAGGTTATTGGTATCAACTCAAGTAAAATATCCTCAACACCTAC
TGGTAGCGGCGGAGCCATTGAGGGAATTGGCTTTGCTATTCCATCAAGCGATGTTGTCACCATTATTAACCAACTAGAGT
CTAACGGAGCTGTTATCAGACCAGCCTTAGGCATTACAATGGTAAACTTAAGTAATCTATCAACCAATGCATTGATTCAA
TTGAATATTCCAACAAGCGTTACCAGCGGTGTTGTCGTAGCCTCTACTCAAGATGGCATGCCTGCTCTTGGTAAATTGGA
GCAGTATGATGTCATTACTGAGGTTGACGGTAAAGAAGTCAGCTCAATTAGTGACCTACAAAGTGTCTTATATAGTCATG
AGATTAACGACACCATTAAGGTAACCTTCTACAGAGGAACTGCTAAGAAGAAAGTTGACATCAAATTAACAAAAACAACT
AAGGATCTAACTAAAAAGCAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

61.275

100

0.614

  htrA Streptococcus gordonii str. Challis substr. CH1

57.855

98.526

0.57

  htrA Streptococcus mitis NCTC 12261

54.66

97.543

0.533

  htrA Streptococcus pneumoniae Rx1

53.634

98.034

0.526

  htrA Streptococcus pneumoniae D39

53.634

98.034

0.526

  htrA Streptococcus pneumoniae R6

53.634

98.034

0.526

  htrA Streptococcus pneumoniae TIGR4

53.634

98.034

0.526