Detailed information NTG0540498

Bioinformatically predicted

Overview

• Name: pilY1
• Type: Machinery gene
• Locus tag: I6J48_RS10795
• Genome accession: NZ_CP070518
• Coordinates: 2292838..2296683 (+)
• Length: 1281 a.a.
• NCBI ID: WP_205468453.1
• Uniprot ID: -
• Organism: Acinetobacter calcoaceticus strain FDAARGOS_1218
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2287838..2301683

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6J48_RS10765 (I6J48_10765)	gmk	2288119..2288748 (-)	630	WP_003653783.1	guanylate kinase	-
I6J48_RS10770 (I6J48_10770)	ispH	2288871..2289821 (+)	951	WP_003653781.1	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	-
I6J48_RS10775 (I6J48_10775)	fimU	2289992..2290465 (+)	474	WP_205468450.1	Tfp pilus assembly protein FimT/FimU	Machinery gene
I6J48_RS10780 (I6J48_10780)	pilV	2290459..2291019 (+)	561	WP_198497025.1	type IV pilus modification protein PilV	Machinery gene
I6J48_RS10785 (I6J48_10785)	pilW	2291019..2292020 (+)	1002	WP_205468451.1	PilW family protein	Machinery gene
I6J48_RS10790 (I6J48_10790)	pilX	2292017..2292826 (+)	810	WP_205468452.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene
I6J48_RS10795 (I6J48_10795)	pilY1	2292838..2296683 (+)	3846	WP_205468453.1	PilC/PilY family type IV pilus protein	Machinery gene
I6J48_RS10800 (I6J48_10800)	pilY2	2296694..2297176 (+)	483	WP_205468454.1	type IV pilin protein	Machinery gene
I6J48_RS10805 (I6J48_10805)	pilE	2297173..2297598 (+)	426	WP_017390964.1	type IV pilin protein	Machinery gene
I6J48_RS10810 (I6J48_10810)	rpsP	2297746..2297997 (+)	252	WP_000260334.1	30S ribosomal protein S16	-
I6J48_RS10815 (I6J48_10815)	rimM	2298018..2298566 (+)	549	WP_003653772.1	ribosome maturation factor RimM	-
I6J48_RS10820 (I6J48_10820)	trmD	2298609..2299364 (+)	756	WP_205468455.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
I6J48_RS10825 (I6J48_10825)	rplS	2299584..2299952 (+)	369	WP_003653770.1	50S ribosomal protein L19	-
I6J48_RS10830 (I6J48_10830)	-	2300006..2300947 (-)	942	WP_080028358.1	triacylglycerol lipase	-

Sequence

Protein

• Length: 1281 a.a.
• Molecular weight: 137434.97 Da
• Isoelectric Point: 7.5995

>NTDB_id=540498 I6J48_RS10795 WP_205468453.1 2292838..2296683(+) (pilY1) [Acinetobacter calcoaceticus strain FDAARGOS_1218]
MKLKLKNFKPNNLWYAICSSSVAFTWLMTSSIVQASDLQIYASPTAGKKTIVMMLDTSGSMTNNSYSENRLAMLKNGMNA
FLASNNPILNDTRVGLGNFSANGDSRSGQILVAAAPLGDASTLNTVGSQRYKLKQAVASLTASGYTPSAHAYAEAAAYLM
GTTTYSETNYVIRKESYIKRVRRSDNKTEYSSCTNSSQIDINTLSQACRSNGWSSWTTFNPGVNTLTDYETSSDRYYDYT
YYYTTFNYAIANADSGIPKSKSNDTASNPNIVVDRNASNLNAIYQSPLPAVANRQSCDGQGIYFLSDGEPNNTTNTRSAT
VMSTALGSTLGANFTCSGGLSNTTAESGWACMGEFAKRLFDKTKNPAGVSIQTAFVGFGSDFSSLSSSDVKNACRLSSRT
QSERKGDDACSPNQTTNAVTAPGYGNGGFFPTQSAQGVTSSVITFINNLDKVPLEPLTTGAISVPYDALNPKNLQEYGYL
RAFEPNPANTYLTWRGNLKKYHVVLSGTNAGAFEANTGGLVYNASGAFRTGTKDYWNSSNYNDGGKVFLGGSYAKVPVPI
VGQNETRDEEGNITKYYYAVQSKIRNLFTDVSAVAADGSLTKISTSGTNLLKIPAAPLEGTNPFDSVANTVSYVLGKFDA
STGQDILKAFPISLKLKILNYLGYSTDIGAATLPSSLVTSNEPYLSMGGSIHSLPVQLTYNGTLDENGNLTSAREQSILY
GTMEGGLHIVDASTGVEQMAFVPADILNDPVASKALVVGQSDASAPAHGMDGAWVSDPAYSITTTGSGSAAVSKVTAKQM
NIYGGMRMGGSSYYGLNVLNPASPKLLFRVGVDQTDYSRMGQSWSKPVLANIRYNGSIKRVMIVGGGYDQCYEKPNITLS
DSCFTNGKAKGNAVYIIDAKTGERLWWTSDTGSNIDNSNMKHSIVSRISTLDRDADGLVDHLYFGDLGGQVFRIDLNNNQ
TKTNSTYSSFGIRVVRLANLATNDSTYDSSNDYTGGNAPRFYEPPTVTIHDYGIRTFITVGIASGDRSTPLDVYPLTGRE
GMSPSTALSGRPVNNVYGIIDKDFIKKNLMSLTDSQLETKDITRSALRKNPQILRSGETRVAQIFFPNTGTGQGGWYRSL
SSTSGGTEKANNSFRIKGGLKAFEEPMAITGTLIVPVYDPQGTGIVAADPCLPRVVGETDQQTYCLPFGACLNSDGSIDQ
NKEDPSGFQTQTGGNCPAGVSECNKNVIGSGIRSVTFVPTEDNPPATNSCGKLKLSGNEQGTGQWQCTSHLVPTRWYERY
R

Nucleotide

• Length: 3846 bp

>NTDB_id=540498 I6J48_RS10795 WP_205468453.1 2292838..2296683(+) (pilY1) [Acinetobacter calcoaceticus strain FDAARGOS_1218]
GTGAAACTAAAATTGAAGAATTTTAAGCCAAATAATTTATGGTATGCCATCTGTTCGAGTTCGGTTGCTTTTACATGGCT
AATGACAAGCTCCATTGTGCAGGCGAGTGATTTACAAATTTATGCTTCGCCTACAGCAGGTAAAAAAACCATTGTGATGA
TGTTGGATACATCAGGAAGTATGACCAACAATAGTTATAGTGAAAACCGTCTGGCCATGCTTAAAAATGGTATGAATGCT
TTTTTGGCAAGTAATAATCCTATTTTGAATGATACTCGTGTGGGGTTGGGAAATTTCTCTGCAAATGGTGATAGTCGAAG
TGGACAAATTTTGGTGGCGGCTGCTCCCTTAGGGGATGCAAGCACTTTAAATACAGTGGGTTCTCAGCGTTATAAATTAA
AACAAGCAGTTGCTAGCTTAACTGCAAGTGGGTATACCCCTTCAGCACATGCTTATGCAGAAGCTGCTGCTTATTTGATG
GGTACAACGACATATTCAGAAACGAATTATGTTATTCGTAAAGAAAGCTATATCAAACGAGTAAGGCGATCCGATAATAA
AACTGAATACTCATCTTGCACCAATTCTTCACAAATTGATATTAATACTTTAAGTCAAGCATGCCGTTCTAATGGCTGGA
GTAGTTGGACCACGTTCAATCCTGGAGTAAATACATTAACAGATTATGAGACTTCATCTGATCGGTATTATGATTATACT
TATTACTACACCACCTTTAATTACGCTATAGCAAACGCAGATAGTGGTATCCCAAAATCAAAATCAAACGATACAGCCAG
CAACCCGAATATTGTTGTAGATAGAAATGCCTCTAATTTAAATGCTATTTACCAATCTCCTTTGCCAGCGGTGGCCAATC
GCCAGAGTTGTGATGGGCAAGGTATCTACTTTTTATCAGATGGAGAGCCGAACAATACAACAAATACACGTTCAGCAACT
GTAATGTCGACAGCCCTAGGCAGCACTTTGGGAGCAAATTTTACTTGTTCTGGAGGTTTGTCTAACACGACAGCAGAGTC
TGGTTGGGCTTGTATGGGGGAATTTGCAAAAAGATTATTTGATAAAACAAAAAACCCAGCTGGAGTTTCTATTCAAACAG
CATTTGTCGGTTTTGGTAGTGACTTTTCTAGTTTAAGTTCTTCTGATGTAAAGAATGCCTGTCGTTTAAGTTCGAGAACC
CAATCTGAGCGAAAAGGAGATGATGCGTGTTCACCGAATCAGACCACAAATGCGGTCACTGCACCTGGTTATGGAAATGG
TGGTTTTTTCCCTACCCAAAGTGCGCAAGGGGTAACGAGTAGTGTTATTACATTTATTAATAATTTAGATAAAGTCCCTT
TAGAGCCTTTAACAACAGGTGCAATCTCTGTTCCGTATGATGCGTTAAATCCAAAAAATTTACAGGAATATGGTTATTTA
CGTGCTTTTGAGCCTAACCCCGCCAATACGTATTTAACATGGAGAGGAAATCTAAAGAAATATCATGTTGTTTTATCAGG
AACAAATGCTGGGGCTTTTGAGGCTAATACGGGGGGATTAGTCTACAACGCAAGTGGAGCATTTAGAACGGGTACGAAGG
ATTACTGGAATAGTTCTAATTATAACGATGGGGGTAAAGTCTTTTTAGGTGGTTCATATGCAAAAGTTCCTGTACCAATT
GTGGGGCAAAATGAAACACGTGATGAAGAAGGAAATATCACAAAATATTATTACGCAGTACAAAGTAAAATCCGCAACTT
ATTTACTGATGTTTCCGCCGTTGCAGCGGATGGTAGCTTAACGAAAATATCGACTTCTGGAACTAATTTGCTAAAAATTC
CCGCTGCTCCACTAGAAGGAACTAATCCTTTTGATAGTGTTGCTAATACAGTAAGTTATGTTTTAGGAAAATTTGATGCC
TCAACTGGACAAGATATTTTAAAAGCTTTCCCGATTAGCTTGAAATTGAAAATATTAAATTATCTAGGTTATTCAACTGA
TATTGGTGCGGCCACTTTACCTTCCTCCTTGGTTACATCGAATGAACCGTATTTATCTATGGGCGGCAGTATTCACTCTT
TACCAGTACAGCTTACCTATAATGGAACATTAGATGAAAATGGGAATTTAACATCTGCTCGAGAGCAATCCATTCTCTAT
GGAACGATGGAAGGCGGTTTACATATTGTGGATGCTTCAACTGGTGTGGAACAAATGGCTTTCGTTCCTGCCGATATATT
AAATGATCCCGTTGCATCAAAAGCTTTAGTTGTTGGCCAAAGTGATGCCTCAGCTCCTGCTCACGGTATGGATGGGGCTT
GGGTATCTGACCCTGCATATAGTATTACTACCACAGGAAGTGGTAGTGCTGCAGTTTCGAAAGTGACTGCAAAGCAAATG
AATATTTATGGTGGCATGCGAATGGGTGGCAGCAGTTATTATGGCTTAAATGTCTTAAATCCTGCTTCACCTAAGCTTCT
CTTTAGAGTAGGAGTAGACCAAACTGATTATAGTCGTATGGGGCAGAGTTGGTCTAAACCTGTACTGGCAAATATTCGTT
ACAACGGGTCTATCAAACGAGTGATGATCGTTGGTGGTGGCTATGACCAATGTTATGAAAAACCAAATATTACCTTGAGC
GACTCTTGCTTTACGAATGGAAAAGCAAAAGGAAATGCTGTCTATATTATTGATGCCAAAACTGGGGAGCGCTTATGGTG
GACTAGTGACACAGGCTCTAATATTGATAACTCTAATATGAAGCATAGTATTGTTAGTCGTATTAGTACATTAGATCGAG
ACGCTGATGGTTTAGTAGACCATTTATATTTCGGTGATTTAGGCGGACAAGTCTTCCGTATCGATCTTAATAATAACCAG
ACAAAAACGAATTCGACTTATAGTAGTTTTGGTATTCGAGTTGTTCGATTAGCCAATTTAGCAACGAATGATTCCACTTA
TGATAGCTCGAACGATTATACAGGTGGGAATGCGCCGCGTTTTTATGAACCTCCTACAGTTACCATACATGATTATGGCA
TCCGCACTTTTATTACTGTAGGTATTGCTTCAGGTGACCGTAGTACCCCATTGGATGTTTATCCGCTTACAGGGCGTGAA
GGTATGTCACCTAGCACAGCATTAAGCGGACGTCCTGTAAATAATGTCTATGGAATTATCGACAAAGACTTTATTAAAAA
GAATCTAATGTCTTTAACTGATAGCCAACTTGAAACAAAAGATATTACTCGATCGGCTCTTAGAAAAAATCCACAAATTT
TACGATCTGGAGAAACACGAGTAGCACAAATTTTCTTTCCAAATACGGGGACGGGCCAAGGTGGTTGGTATCGTTCACTT
TCTAGTACTAGCGGTGGTACAGAGAAAGCCAATAATAGTTTCCGTATTAAAGGTGGACTAAAAGCTTTTGAAGAGCCAAT
GGCAATTACGGGGACTTTAATTGTGCCTGTTTATGACCCGCAGGGAACAGGCATTGTGGCGGCAGACCCATGTTTACCAC
GTGTGGTAGGTGAAACGGATCAGCAGACTTACTGTTTACCATTTGGAGCCTGTCTTAATTCTGATGGATCCATTGATCAG
AATAAAGAAGATCCTAGCGGGTTTCAAACACAAACAGGTGGTAACTGCCCAGCAGGAGTTTCTGAATGTAATAAAAACGT
CATTGGCTCAGGTATTCGTAGCGTGACATTTGTACCAACTGAGGATAACCCACCAGCTACAAATAGTTGTGGGAAGTTAA
AATTGTCTGGTAATGAGCAAGGAACTGGACAGTGGCAATGTACAAGTCATTTAGTTCCTACGCGTTGGTATGAGCGTTAT
CGCTAA

Domains

Predicted by InterproScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (712-961)

• von Willebrand factor type A domain (VWA_2) (51-168)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY1	Acinetobacter baumannii D1279779	85.859	100	0.863