Detailed information NTG0539607

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: JRY11_RS06870
• Genome accession: NZ_CP070382
• Coordinates: 1272903..1275113 (+)
• Length: 736 a.a.
• NCBI ID: WP_179107682.1
• Uniprot ID: -
• Organism: Lactococcus lactis strain KF140
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1267903..1280113

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JRY11_RS06845 (JRY11_001374)	-	1268755..1269318 (+)	564	WP_004255233.1	GNAT family N-acetyltransferase	-
JRY11_RS06850 (JRY11_001375)	-	1269422..1269820 (+)	399	WP_023188528.1	hypothetical protein	-
JRY11_RS06855 (JRY11_001376)	-	1269925..1270857 (+)	933	WP_025016985.1	ABC transporter ATP-binding protein	-
JRY11_RS06860 (JRY11_001377)	-	1270854..1272215 (+)	1362	WP_023188530.1	ABC transporter permease	-
JRY11_RS06865 (JRY11_001378)	comEA	1272275..1272922 (+)	648	WP_023188531.1	ComEA family DNA-binding protein	Machinery gene
JRY11_RS06870 (JRY11_001379)	comEC	1272903..1275113 (+)	2211	WP_179107682.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
JRY11_RS06875 (JRY11_001380)	-	1275398..1276174 (+)	777	WP_023188533.1	alpha/beta hydrolase family protein	-
JRY11_RS06880 (JRY11_001381)	-	1276359..1276574 (+)	216	WP_004255250.1	F0F1 ATP synthase subunit C	-
JRY11_RS06885 (JRY11_001382)	atpB	1276619..1277332 (+)	714	WP_004255255.1	F0F1 ATP synthase subunit A	-
JRY11_RS06890 (JRY11_001383)	atpF	1277347..1277853 (+)	507	WP_004255258.1	F0F1 ATP synthase subunit B	-
JRY11_RS06895 (JRY11_001384)	-	1277855..1278382 (+)	528	WP_012898339.1	F0F1 ATP synthase subunit delta	-
JRY11_RS06900 (JRY11_001385)	atpA	1278569..1280071 (+)	1503	WP_004255265.1	F0F1 ATP synthase subunit alpha	-

Sequence

Protein

• Length: 736 a.a.
• Molecular weight: 84570.20 Da
• Isoelectric Point: 9.6385

>NTDB_id=539607 JRY11_RS06870 WP_179107682.1 1272903..1275113(+) (comEC) [Lactococcus lactis strain KF140]
MSCVLNKIPLIFLAYLSVILYFLIFNFNLLCLILFIFSSLLASYRKYYLVIPFLLVMGSFFLVVKMDTIKNSENQPTTLS
KITMIPDTIQVNGDLLSFQGKERDQNYQVYETLKSKKEQKFYQNLSQNCQLSFTGNLQIPEKQRNFNGFDNQKYLASQDI
YRQITIDKINKIVLNDTFDLRVLRRKAIVWSQTHFPKPMNDYMTGLLFGFLSKDFNQIGDIYSSLGIIHLFALLGMQVNF
FIDWFRRIILRLGITREKLNIWQIPFSIFYAFMTGFSVSVLRALFQKNIRLNPLDNLAVTTFLLMIVSPKFLLTTGGQLT
LFYAFVISMINHKFSELKGIRKLLTESSVISLSVLPLLILDFHIFQPFSILLTIGFGFLFDVILLPLLLGTFLLSLIGYN
FNINHIFQILEWLIHEVDLPLHYPLVLGNPRPIELLILFFLIGLLIDNLFKKRRQIIFAGLIVCSFFICKNPIYPSITAV
DIGQGDSIFLQDKFNKETILIDTGGRLALPQESWQKPQSQTNAEKTLIPYLESVGVSQIDQLILTHTDADHVGDFLNLAD
KIKIKEIWVSPGELTNNHFVEKLKKANIAIHISKVGDKIPIFDSALQVLSNGYTGKGDNNDSIVTYGNFYHTKFLFTGDL
EQEGEKELLKNYPKLKVDVLKVGHHGSKTSSNSDFIKEINPKLALISVGEKNRYGHPNQETLETLKKNQIRILRTDQKGA
LKLMQINQQWRIQTVR

Nucleotide

• Length: 2211 bp

>NTDB_id=539607 JRY11_RS06870 WP_179107682.1 1272903..1275113(+) (comEC) [Lactococcus lactis strain KF140]
ATGAGTTGTGTTTTGAATAAAATTCCTTTGATATTTTTAGCTTATCTTTCTGTTATCTTGTATTTTTTAATCTTCAATTT
TAATTTACTTTGTCTCATTTTGTTCATTTTTTCAAGTTTACTTGCCTCATATAGAAAATATTATTTAGTCATCCCATTTT
TATTAGTTATGGGAAGTTTTTTCTTAGTAGTAAAAATGGATACGATTAAGAATAGTGAAAATCAGCCAACCACTCTTTCC
AAAATTACAATGATCCCCGACACTATCCAAGTTAATGGTGATTTACTAAGTTTTCAAGGAAAAGAAAGAGACCAAAATTA
TCAAGTTTACGAGACTCTAAAAAGTAAAAAAGAACAAAAATTTTATCAAAATCTAAGTCAAAATTGTCAGCTGAGTTTCA
CAGGAAACCTTCAAATTCCAGAAAAACAAAGAAATTTTAATGGATTCGATAATCAAAAGTATTTAGCGAGCCAGGATATT
TATCGGCAAATTACGATTGATAAAATTAATAAAATAGTTTTAAACGACACTTTTGACCTCCGTGTTTTAAGACGAAAAGC
AATTGTCTGGTCACAAACTCATTTTCCAAAGCCAATGAATGATTATATGACTGGCTTACTTTTTGGCTTTTTAAGTAAAG
ATTTTAATCAAATAGGAGACATTTACAGTTCATTAGGAATTATTCATCTTTTTGCCTTATTGGGAATGCAAGTTAATTTT
TTCATTGATTGGTTTCGTAGAATTATTCTTCGACTAGGAATAACGAGAGAAAAATTAAATATTTGGCAAATTCCCTTTTC
AATTTTTTATGCATTTATGACAGGATTTTCGGTTTCAGTATTACGAGCTTTATTTCAAAAAAATATTCGTCTAAATCCTT
TAGATAACCTAGCAGTGACAACCTTTCTTCTGATGATTGTCAGTCCTAAATTTTTACTGACAACAGGAGGACAACTAACT
TTATTTTATGCTTTTGTCATTTCAATGATTAATCATAAATTTTCAGAACTAAAAGGAATAAGAAAATTACTGACAGAATC
ATCAGTGATTTCTTTGAGTGTTTTACCTTTACTCATTTTGGATTTTCATATCTTTCAGCCTTTTTCAATTTTACTGACGA
TTGGCTTTGGCTTTTTATTTGATGTAATCTTATTGCCTTTACTATTAGGAACTTTTCTCTTGTCTCTAATTGGCTATAAT
TTTAATATAAATCATATTTTTCAAATTCTAGAATGGCTAATTCATGAGGTTGATTTACCCTTACATTATCCTTTGGTTTT
AGGGAATCCCCGGCCAATTGAATTATTAATCTTATTTTTCCTAATCGGTTTGTTAATTGATAATCTCTTTAAGAAAAGAA
GACAAATAATTTTTGCTGGCCTAATTGTTTGTAGTTTTTTTATTTGTAAAAATCCAATTTACCCCAGTATCACAGCAGTT
GATATTGGTCAAGGAGATAGTATTTTTTTGCAAGATAAATTTAATAAAGAAACAATTTTGATTGATACAGGCGGACGATT
AGCCCTTCCGCAAGAAAGTTGGCAAAAACCTCAAAGTCAAACAAATGCCGAAAAAACACTCATTCCATATCTTGAATCTG
TTGGAGTAAGTCAAATCGACCAGCTCATTTTGACGCATACGGACGCTGACCATGTTGGAGATTTTTTGAATTTAGCTGAT
AAAATAAAAATAAAAGAAATTTGGGTTAGCCCCGGTGAACTGACAAATAATCATTTTGTAGAAAAATTGAAGAAAGCAAA
TATTGCGATTCACATCAGTAAAGTTGGAGATAAAATTCCAATCTTTGATAGTGCTTTACAAGTTTTATCAAATGGTTATA
CAGGAAAAGGGGATAATAATGATTCTATCGTGACTTATGGAAATTTTTATCATACAAAATTTCTATTTACAGGGGATTTA
GAACAAGAAGGAGAAAAAGAACTGCTCAAGAATTATCCTAAATTGAAAGTTGATGTCTTAAAAGTAGGTCATCATGGCAG
TAAAACAAGTTCAAACTCTGACTTTATTAAAGAAATTAATCCCAAACTTGCCCTCATTTCGGTTGGAGAGAAAAATCGAT
ATGGACATCCCAATCAAGAAACTTTAGAAACATTAAAAAAAAACCAAATCAGAATACTGAGAACCGATCAAAAGGGAGCG
CTTAAACTAATGCAAATCAATCAACAGTGGCGAATCCAAACAGTTAGATAA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (28-171)

• Metallo-beta-lactamase superfamily (Lactamase_B) (483-689)

• Competence protein (Competence) (206-446)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Lactococcus lactis subsp. cremoris KW2	76.359	100	0.764
comEC/celB	Streptococcus mitis SK321	44.489	100	0.45
comEC/celB	Streptococcus mitis NCTC 12261	44.28	100	0.447
comEC/celB	Streptococcus pneumoniae TIGR4	43.28	100	0.438
comEC/celB	Streptococcus pneumoniae Rx1	42.876	100	0.433
comEC/celB	Streptococcus pneumoniae D39	42.876	100	0.433
comEC/celB	Streptococcus pneumoniae R6	42.876	100	0.433