Detailed information    

insolico Bioinformatically predicted

Overview

Name   htrA   Type   Regulator
Locus tag   JVB21_RS08755 Genome accession   NZ_CP070381
Coordinates   1753195..1754415 (-) Length   406 a.a.
NCBI ID   WP_205271932.1    Uniprot ID   -
Organism   Lactococcus taiwanensis strain K_LL001     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1748195..1759415
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JVB21_RS08730 (JVB21_08730) - 1748418..1749170 (+) 753 WP_205271930.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  JVB21_RS08735 (JVB21_08735) - 1749223..1750236 (-) 1014 WP_205271931.1 hypothetical protein -
  JVB21_RS08740 (JVB21_08740) - 1750344..1750568 (-) 225 WP_075525577.1 YkuJ family protein -
  JVB21_RS08745 (JVB21_08745) - 1750677..1752017 (-) 1341 WP_200407588.1 glycosyltransferase family 4 protein -
  JVB21_RS08750 (JVB21_08750) - 1752076..1753074 (-) 999 WP_075525579.1 glycosyltransferase -
  JVB21_RS08755 (JVB21_08755) htrA 1753195..1754415 (-) 1221 WP_205271932.1 S1C family serine protease Regulator
  JVB21_RS08760 (JVB21_08760) rlmH 1754798..1755277 (+) 480 WP_075525581.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  JVB21_RS08765 (JVB21_08765) - 1755295..1756005 (+) 711 WP_200407585.1 DNA alkylation repair protein -
  JVB21_RS08770 (JVB21_08770) yajC 1756087..1756413 (+) 327 WP_205271933.1 preprotein translocase subunit YajC -
  JVB21_RS08775 (JVB21_08775) - 1756915..1757649 (+) 735 WP_075525583.1 isoprenyl transferase -
  JVB21_RS08780 (JVB21_08780) - 1757649..1758452 (+) 804 WP_075525584.1 phosphatidate cytidylyltransferase -

Sequence

Protein


Download         Length: 406 a.a.        Molecular weight: 41561.77 Da        Isoelectric Point: 4.6749

>NTDB_id=539559 JVB21_RS08755 WP_205271932.1 1753195..1754415(-) (htrA) [Lactococcus taiwanensis strain K_LL001]
MAKGNLGKLLLTGVVGGAIALGGSAIYQTTTNQNGTSSSNTTSTKVSNVSVNVSTDVTAAIKKVSGSVVSVMNYQKQNSS
DDFSSIFGNKSSSASSDSLQLASEGSGVIYKKDGDSAYVVTNYHVIASNDSLDVLLSGGQKVSAKVVGYDEYTDLAVLKI
SSEHVKDVATFADSSKLTVGEPTIAVGSPLGSQFANTATEGILSATSRQVTLSQENGQTTNINAIQTDAAINPGNSGGAL
INIDGQVIGITQSKLTTTEDGSTSVEGMGFAIPSNDVVNIINKLESDGKVSRPALGIRMVDLSDLSTNDSSQLNLPSSVT
GGVVVYSVQSGMPAATAGLKAGDVITKVGDTSVTSSTDLQSALYSHNVNDTVKVTYYRDGKSHTANIKLDKTTSELDTSS
SSSSSN

Nucleotide


Download         Length: 1221 bp        

>NTDB_id=539559 JVB21_RS08755 WP_205271932.1 1753195..1754415(-) (htrA) [Lactococcus taiwanensis strain K_LL001]
ATGGCTAAAGGTAATCTAGGAAAATTGCTTTTGACAGGTGTTGTGGGAGGTGCTATTGCTCTAGGAGGTAGTGCCATCTA
TCAAACGACCACTAATCAAAATGGAACAAGTTCAAGTAACACAACCAGTACAAAAGTAAGCAATGTTTCAGTGAATGTCA
GTACAGATGTGACAGCAGCAATCAAGAAAGTTTCAGGTTCTGTTGTATCCGTCATGAATTATCAAAAGCAAAACAGTTCT
GATGATTTCAGCTCTATTTTTGGCAATAAAAGTTCAAGCGCCTCATCTGATAGTCTTCAGTTAGCAAGTGAGGGTTCCGG
GGTTATCTACAAGAAAGATGGAGACTCCGCCTATGTGGTAACAAACTACCATGTTATTGCGAGCAATGATTCTCTGGATG
TCTTACTCTCAGGCGGACAAAAAGTGAGTGCTAAGGTAGTAGGTTACGATGAATATACAGACCTTGCTGTACTAAAAATT
AGCTCAGAACATGTGAAAGACGTAGCAACTTTTGCAGATTCTAGCAAGTTGACAGTGGGTGAACCGACCATTGCAGTCGG
CTCACCTCTAGGAAGTCAATTTGCCAATACCGCAACAGAAGGGATACTATCTGCTACAAGTCGCCAAGTAACTCTCTCTC
AAGAGAATGGGCAAACGACTAATATAAATGCTATTCAAACAGATGCAGCAATCAATCCAGGGAATTCTGGGGGAGCGCTT
ATCAACATTGATGGTCAAGTAATTGGGATTACCCAAAGTAAACTGACAACTACAGAAGATGGCTCAACAAGTGTCGAAGG
CATGGGATTCGCTATCCCTTCTAATGATGTAGTAAATATTATTAATAAGTTAGAATCCGATGGCAAAGTTTCCCGCCCTG
CCTTGGGTATCCGAATGGTTGATTTGTCTGACTTATCAACTAATGACAGCTCTCAACTTAACTTACCAAGTAGTGTCACA
GGTGGGGTCGTGGTTTATTCTGTACAATCAGGTATGCCTGCTGCTACAGCTGGCCTGAAAGCGGGGGATGTAATTACTAA
GGTTGGGGATACATCCGTTACTTCATCTACCGATTTACAAAGTGCTCTTTATTCTCATAATGTCAATGATACTGTCAAAG
TGACTTATTATCGCGACGGAAAATCACATACTGCTAATATTAAGTTAGACAAGACAACAAGTGAACTTGATACCAGCAGT
TCAAGCTCGTCAAGCAACTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(293-389)

Peptidase family M50 (Peptidase_M50)

(241-394)

Trypsin-like peptidase domain (Trypsin_2)

(105-250)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus gordonii str. Challis substr. CH1

54.847

96.552

0.53
  htrA Streptococcus mitis NCTC 12261

54.881

93.35

0.512
  htrA Streptococcus mutans UA159

54.945

89.655

0.493
  htrA Streptococcus pneumoniae TIGR4

57.771

83.99

0.485
  htrA Streptococcus pneumoniae D39

57.771

83.99

0.485
  htrA Streptococcus pneumoniae Rx1

57.771

83.99

0.485
  htrA Streptococcus pneumoniae R6

57.771

83.99

0.485