Detailed information NTG0539530

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: JVB21_RS00300
• Genome accession: NZ_CP070381
• Coordinates: 70983..73172 (+)
• Length: 729 a.a.
• NCBI ID: WP_338085396.1
• Uniprot ID: -
• Organism: Lactococcus taiwanensis strain K_LL001
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 65983..78172

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JVB21_RS00275 (JVB21_00275)	-	67159..67335 (+)	177	WP_205272085.1	hypothetical protein	-
JVB21_RS00280 (JVB21_00280)	-	67487..67897 (+)	411	WP_075526239.1	hypothetical protein	-
JVB21_RS00285 (JVB21_00285)	-	67988..68908 (+)	921	WP_075526238.1	ABC transporter ATP-binding protein	-
JVB21_RS00290 (JVB21_00290)	-	68911..70257 (+)	1347	WP_205272086.1	ABC transporter permease	-
JVB21_RS00295 (JVB21_00295)	comEA	70328..70981 (+)	654	WP_205272087.1	helix-hairpin-helix domain-containing protein	Machinery gene
JVB21_RS00300 (JVB21_00300)	comEC	70983..73172 (+)	2190	WP_338085396.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
JVB21_RS00305 (JVB21_00305)	-	73395..74171 (+)	777	WP_200407402.1	alpha/beta hydrolase	-
JVB21_RS00310 (JVB21_00310)	-	74370..74585 (+)	216	WP_004255250.1	F0F1 ATP synthase subunit C	-
JVB21_RS00315 (JVB21_00315)	atpB	74630..75343 (+)	714	WP_075526233.1	F0F1 ATP synthase subunit A	-
JVB21_RS00320 (JVB21_00320)	atpF	75358..75864 (+)	507	WP_075526232.1	F0F1 ATP synthase subunit B	-
JVB21_RS00325 (JVB21_00325)	-	75878..76405 (+)	528	WP_075526231.1	F0F1 ATP synthase subunit delta	-
JVB21_RS00330 (JVB21_00330)	atpA	76420..77922 (+)	1503	WP_075526230.1	F0F1 ATP synthase subunit alpha	-

Sequence

Protein

• Length: 729 a.a.
• Molecular weight: 83612.83 Da
• Isoelectric Point: 10.2980

>NTDB_id=539530 JVB21_RS00300 WP_338085396.1 70983..73172(+) (comEC) [Lactococcus taiwanensis strain K_LL001]
MPLIFLAYLTVLLYFCIFSNNIIIGCIFLLSLVIAFWRKFYVFFPLLLIFGIYFYLFNAYHSQKMALPEVAFHQITPRID
TLQVNGDLLSFRGRVHDRDYQAYATLQSKKEQTFFKNLAKNCRISFTGNLEKPAAQRNFEGFDEQKYYSNQNIYRQIKIR
QINAVKLTHNFNIWLLRRKGIVWAQTHFPRPMSSYMTGLLFGYLGKDFSQMTTIYSALGIIHLFALSGMQVNFFVEVLRK
ILLKIGIRLEFIPLFKFLFSIFYAILTGFSLSVLRALFQKNIPAKGLDNMAITTLGLLLVYPGFLLDKGGQLTLLYAFTI
SMLQQFSFTKSNIREALFKTFALNLIAFPLLIFDFFSFQPLSIILTIGFGLIFDKIMLPLLLITFLLSLTGLSVNLNILF
LLLEKMMRHLYQWFSYTPVFGKPSLIGLLGLFLTAGLLVNALRKKKLRFFCAFSLLLILFFVKHPVAPTITMIDVGQGDS
ILLQDRWNQETVLIDTGGRLTLPQPKWKKAHISTNADNTLIPYLKAEGISTLDHLILTHTDADHVGDFLTLARTIKIRDV
WVSPGELTVPTFVHQLKRAQLPIHIVKSGDKLPIFNGHLEILSNGYTHKGDNDDSIVTYGDFFNKKFLFTGDLEQEGELK
LLKAYPRLKVDVLKVGHHGSKTSSNPYFIRQIDPQLALISVGKKNRYGHPNQETLATMKKAQIKILRTDQVGAVQLIYHH
QKWQVKTVR

Nucleotide

• Length: 2190 bp

>NTDB_id=539530 JVB21_RS00300 WP_338085396.1 70983..73172(+) (comEC) [Lactococcus taiwanensis strain K_LL001]
GTGCCCTTAATTTTTTTAGCCTATTTGACTGTCCTTTTATATTTCTGTATTTTTAGTAACAATATTATTATTGGTTGTAT
TTTTTTACTCAGTTTAGTAATCGCCTTTTGGCGGAAATTTTATGTGTTTTTTCCTCTTCTTTTAATCTTTGGTATCTATT
TTTATTTATTCAATGCTTACCATAGTCAAAAAATGGCCCTTCCTGAGGTTGCTTTTCATCAGATAACTCCTCGTATAGAT
ACCCTTCAAGTCAATGGTGATTTGCTTAGTTTTCGTGGGAGAGTTCACGATCGAGATTATCAAGCCTATGCCACACTTCA
ATCTAAAAAAGAACAAACTTTCTTTAAAAATTTAGCTAAAAATTGTCGGATCAGTTTCACAGGAAACCTTGAAAAACCGG
CAGCGCAACGCAATTTTGAAGGGTTTGATGAACAAAAATACTATTCCAATCAGAACATCTACAGACAGATTAAAATCAGA
CAAATTAACGCTGTAAAGTTAACGCATAATTTTAACATTTGGCTCCTAAGACGTAAGGGGATTGTCTGGGCACAAACCCA
TTTTCCTCGCCCGATGTCCAGCTATATGACTGGTCTTCTTTTTGGTTATTTAGGGAAGGACTTTAGTCAGATGACTACGA
TTTACAGTGCCCTTGGAATTATCCACCTCTTTGCCCTTTCCGGTATGCAAGTCAATTTTTTTGTAGAAGTATTGCGTAAA
ATTTTGCTAAAAATTGGAATAAGGCTTGAATTTATTCCCTTATTTAAATTCTTATTTTCTATCTTTTATGCTATTCTGAC
AGGTTTTTCCCTCTCAGTACTTCGTGCGCTCTTTCAAAAAAATATCCCTGCTAAAGGTTTGGACAATATGGCAATTACCA
CACTGGGCTTACTTTTAGTTTACCCAGGATTTCTGTTAGATAAAGGCGGACAACTAACACTTTTGTATGCTTTTACTATA
AGTATGCTCCAGCAATTTTCATTTACAAAAAGTAACATACGAGAAGCTTTATTTAAAACGTTTGCATTAAATCTAATTGC
TTTCCCCCTACTGATCTTTGATTTTTTTAGTTTTCAACCTCTCTCAATTATTTTGACAATTGGTTTTGGCTTAATTTTTG
ATAAGATCATGCTTCCTCTATTATTGATCACCTTTTTATTATCTCTGACAGGTCTGTCAGTGAATTTGAACATACTATTT
TTACTACTAGAGAAAATGATGCGTCACCTTTACCAGTGGTTCTCCTATACACCAGTTTTTGGCAAACCGAGTCTCATTGG
GCTTTTAGGTTTATTCTTGACAGCTGGACTTTTAGTCAATGCCCTGCGAAAGAAAAAATTACGATTTTTTTGTGCTTTTT
CTCTCTTGTTGATTCTATTTTTTGTCAAACATCCTGTAGCGCCGACTATCACGATGATAGATGTGGGCCAGGGTGATAGT
ATTTTATTGCAGGATCGGTGGAATCAAGAAACGGTACTTATTGATACAGGTGGACGTCTTACCTTACCTCAGCCAAAATG
GAAAAAGGCACACATCTCTACAAATGCAGATAACACACTTATTCCTTATTTAAAAGCTGAGGGGATTTCAACACTTGATC
ACCTGATTTTAACGCATACTGATGCGGATCACGTTGGCGATTTTTTAACGTTGGCACGAACTATAAAAATAAGGGATGTT
TGGGTAAGTCCAGGAGAGTTGACAGTACCCACTTTTGTTCACCAGCTTAAAAGAGCTCAGCTTCCAATTCATATTGTGAA
GAGCGGGGATAAGCTTCCTATTTTTAATGGTCATTTAGAAATTCTTTCCAATGGCTATACGCATAAAGGGGATAACGACG
ATTCTATTGTTACTTATGGCGATTTTTTTAATAAAAAATTTTTATTTACGGGAGATTTAGAACAAGAAGGAGAGCTTAAA
CTTTTAAAAGCATACCCTCGCCTAAAAGTAGATGTCTTAAAAGTCGGACATCATGGAAGTAAAACGAGTTCTAATCCCTA
CTTTATTAGACAAATTGACCCGCAATTGGCTCTTATTTCTGTTGGAAAGAAGAATCGATATGGTCATCCCAATCAAGAGA
CACTTGCTACGATGAAAAAAGCTCAGATTAAAATCTTACGTACAGATCAAGTAGGTGCAGTTCAACTCATATATCATCAT
CAAAAATGGCAAGTAAAAACTGTAAGATAA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (475-675)

• Domain of unknown function (DUF4131) (DUF4131) (22-164)

• Competence protein (Competence) (199-443)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Lactococcus lactis subsp. cremoris KW2	58.379	99.863	0.583
comEC/celB	Streptococcus mitis SK321	42.035	100	0.431
comEC/celB	Streptococcus mitis NCTC 12261	42.204	100	0.431
comEC/celB	Streptococcus pneumoniae R6	41.935	100	0.428
comEC/celB	Streptococcus pneumoniae Rx1	41.935	100	0.428
comEC/celB	Streptococcus pneumoniae D39	41.935	100	0.428
comEC/celB	Streptococcus pneumoniae TIGR4	40.995	100	0.418