Detailed information NTG0539418

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: LK431_RS04060
• Genome accession: NZ_CP085951
• Coordinates: 799720..800841 (-)
• Length: 373 a.a.
• NCBI ID: WP_012055334.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain FDAARGOS_1561
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 794720..805841

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LK431_RS04030 (LK431_04030)	dusB	795163..796143 (+)	981	WP_041175395.1	tRNA dihydrouridine synthase DusB	-
LK431_RS04035 (LK431_04035)	fis	796137..796436 (+)	300	WP_005651583.1	DNA-binding transcriptional regulator Fis	-
LK431_RS04040 (LK431_04040)	smpB	796531..797016 (-)	486	WP_005647965.1	SsrA-binding protein SmpB	-
LK431_RS04045 (LK431_04045)	pfkA	797256..798221 (-)	966	WP_048955057.1	6-phosphofructokinase	-
LK431_RS04050 (LK431_04050)	-	798317..798898 (-)	582	WP_111695197.1	hypothetical protein	-
LK431_RS04055 (LK431_04055)	yaaA	798891..799667 (-)	777	WP_005666012.1	peroxide stress protein YaaA	-
LK431_RS04060 (LK431_04060)	dprA	799720..800841 (-)	1122	WP_012055334.1	DNA-processing protein DprA	Machinery gene
LK431_RS04065 (LK431_04065)	leuA	801385..802932 (+)	1548	WP_111695196.1	2-isopropylmalate synthase	-
LK431_RS04070 (LK431_04070)	leuB	803018..804094 (+)	1077	WP_038440279.1	3-isopropylmalate dehydrogenase	-
LK431_RS04075 (LK431_04075)	leuC	804271..805680 (+)	1410	WP_011272333.1	3-isopropylmalate dehydratase large subunit	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 41639.71 Da
• Isoelectric Point: 6.4124

>NTDB_id=539418 LK431_RS04060 WP_012055334.1 799720..800841(-) (dprA) [Haemophilus influenzae strain FDAARGOS_1561]
MNDITYTLLRLMQVPKLGGVGIDKILSNITLNELLNYDDVAFRQMGWGAIQIRRWFKPEAKFIEPALAWSQKEGNHLVNY
FSPFYPFLLKQTANFPPLLFVKGNLTALSQRQMAMVGSRYCTTYGEYWAKHFATELSLAGFTITSGLALGIDGHCHQAVV
NIQGQTIAVLGSGLEQIYPSKHQRLSAQIIENNGALVSEFLPNQAPIAANFPRRNRIISGLSVGTLVVEATEKSGSLITA
RYALEQNREVFAVPGNIQNESSQGCHRLIKQGAMLVENAKDILETLYQHSIHSQTEIDFDQIAVPNYTPPPDPRRLVEAP
SHPKLYSRIGYTPVSIDDLAEEFNLSVDVLLVQLLDLELQDLIISENGLYKRV

Nucleotide

• Length: 1122 bp

>NTDB_id=539418 LK431_RS04060 WP_012055334.1 799720..800841(-) (dprA) [Haemophilus influenzae strain FDAARGOS_1561]
ATGAATGACATTACCTACACATTACTCCGTTTAATGCAAGTGCCTAAACTTGGCGGCGTTGGCATTGATAAAATTTTGTC
CAATATTACCTTAAATGAATTACTTAATTATGATGATGTTGCTTTCCGACAAATGGGATGGGGAGCCATTCAAATTCGCC
GTTGGTTCAAACCTGAAGCAAAATTTATTGAGCCAGCACTCGCGTGGTCACAAAAAGAGGGAAATCATTTAGTAAATTAT
TTTTCCCCTTTTTATCCCTTTTTATTGAAACAAACCGCAAACTTTCCGCCACTATTATTTGTAAAAGGAAATTTAACCGC
ACTTTCACAACGCCAAATGGCAATGGTTGGGAGCCGTTATTGCACGACTTATGGAGAATATTGGGCAAAACATTTTGCAA
CAGAACTTTCATTAGCGGGTTTTACCATAACAAGCGGTTTAGCATTAGGAATTGATGGTCATTGTCATCAGGCTGTCGTT
AATATTCAAGGGCAAACTATTGCGGTCTTAGGCAGTGGATTAGAACAAATCTATCCCTCTAAACATCAAAGATTATCAGC
ACAAATCATCGAAAATAATGGTGCATTAGTCTCTGAATTTTTACCAAACCAAGCACCTATTGCTGCTAATTTTCCACGCC
GTAATCGGATTATTAGTGGGCTTTCAGTCGGCACGCTTGTTGTTGAAGCCACCGAAAAAAGCGGCTCTCTTATTACTGCG
CGGTATGCGTTGGAACAAAACCGAGAGGTTTTTGCTGTGCCAGGCAATATTCAAAATGAATCAAGTCAAGGTTGTCATCG
CCTGATTAAACAAGGCGCAATGTTGGTAGAAAATGCAAAGGATATTTTGGAAACGCTCTACCAACATTCTATCCACAGCC
AAACTGAAATTGATTTTGACCAGATCGCCGTGCCTAATTACACGCCACCACCCGATCCTCGCCGATTAGTAGAAGCACCA
AGCCACCCGAAACTTTATTCACGTATTGGCTATACTCCTGTGAGCATTGATGATTTAGCTGAAGAATTTAATTTAAGTGT
CGATGTTTTACTTGTTCAATTGCTCGATCTTGAGCTACAAGATCTTATCATAAGTGAAAATGGCTTATATAAACGCGTTT
AA

Domains

Predicted by InterProScan.

• DprA winged helix domain (WHD_DprA) (311-366)

• DNA recombination-mediator protein A (DNA_processg_A) (71-277)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	99.196	100	0.992
dprA	Glaesserella parasuis strain SC1401	52.011	93.298	0.485
dprA	Vibrio campbellii strain DS40M4	43.617	100	0.44
dprA	Vibrio cholerae O1 biovar El Tor strain E7946	43.014	97.855	0.421
dprA	Vibrio cholerae strain A1552	43.014	97.855	0.421
dprA	Legionella pneumophila strain ERS1305867	40.634	93.029	0.378