Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEC/celB   Type   Machinery gene
Locus tag   I6K87_RS03120 Genome accession   NZ_CP069892
Coordinates   632130..634358 (-) Length   742 a.a.
NCBI ID   WP_204982753.1    Uniprot ID   -
Organism   Streptococcus anginosus strain FDAARGOS_1357     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 627130..639358
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6K87_RS03090 (I6K87_03090) - 627347..628624 (-) 1278 WP_070497022.1 dihydroorotase -
  I6K87_RS03095 (I6K87_03095) - 628637..629107 (-) 471 WP_204982751.1 NUDIX hydrolase -
  I6K87_RS03100 (I6K87_03100) - 629144..629797 (-) 654 WP_049517463.1 uracil-DNA glycosylase -
  I6K87_RS03105 (I6K87_03105) - 629821..630807 (-) 987 WP_204982752.1 Gfo/Idh/MocA family protein -
  I6K87_RS03110 (I6K87_03110) - 631050..631208 (+) 159 WP_003042740.1 hypothetical protein -
  I6K87_RS03115 (I6K87_03115) - 631351..632049 (-) 699 WP_003029857.1 DUF805 domain-containing protein -
  I6K87_RS03120 (I6K87_03120) comEC/celB 632130..634358 (-) 2229 WP_204982753.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  I6K87_RS03125 (I6K87_03125) comEA/celA/cilE 634342..635046 (-) 705 WP_204982754.1 helix-hairpin-helix domain-containing protein Machinery gene
  I6K87_RS03130 (I6K87_03130) smpB 635228..635695 (-) 468 WP_022526922.1 SsrA-binding protein SmpB -
  I6K87_RS03135 (I6K87_03135) rnr 635658..637991 (-) 2334 WP_204982755.1 ribonuclease R -
  I6K87_RS03140 (I6K87_03140) secG 638083..638316 (-) 234 WP_003024744.1 preprotein translocase subunit SecG -
  I6K87_RS03145 (I6K87_03145) rpmG 638356..638505 (-) 150 WP_003024746.1 50S ribosomal protein L33 -

Sequence


Protein


Download         Length: 742 a.a.        Molecular weight: 85037.92 Da        Isoelectric Point: 10.0271

>NTDB_id=537234 I6K87_RS03120 WP_204982753.1 632130..634358(-) (comEC/celB) [Streptococcus anginosus strain FDAARGOS_1357]
MSQWIKRFPIKPIYIAFLLVWLYFAIYQSSWLGWLGFIFLVICLFRFYSPKECFMTFMILICFAGFFFIRREIAEQKTKV
EPSPIRQVAVLPDTIKVNGDSLSFRGKANGQTYQVYYKLKSKEEQLAFQNLSSLVTLTVEGEFEIPEKKRNFAGFDYQSY
LKTQGIYRILKVDTILSSQDRISLHPFEWLSSWRRKALVFIKNHFPNPMSNYMTGLLFGALDTSFDEMSNLYSSLGIIHL
FALSGMQVGFFMEGFRKLLLRLGLTQEMVHKCQYPFSFFYAGMTGFSVSVVRSLVQKLLSQHGITKLDNFALTMMILSLI
MPSFLLTAGGVLSCAYAFVISVIDFESLTSWRNIVVESSVISLGVLPILIFYFGEFQPWSILLTFVFSLIFDAMMLPGLT
LIFLFSPLIKLTQVNFLFEGLENSIRWIASVFGRPIVFGQPSPLLLIVMLLVLAILYDIRKNKKWVIFLSLLLSLLFFIN
KFPLQNEITMVDVGQGDSIFLRDWKGRNVLIDVGGREEIRTKEAWQKRATGSNAEKTLIPYLKSRGVDTIDTLVLTNPNP
DYAGDVLEVAKKFAIKKIYIARSSLSNADFLEKLRKINTFIHVVKQGDKLPIFDHHLKVLSSASKNDHSIVLYGRFFRTR
FLFASDLKEEGEAKLMQHYPKLKTDVLKVGQHGAKNSSHSKFLQQIEPAVALISVGKNNQSKQPSQDTIERFAQLPAKVY
RTDEQGAVKFSGWTNWRLEMVK

Nucleotide


Download         Length: 2229 bp        

>NTDB_id=537234 I6K87_RS03120 WP_204982753.1 632130..634358(-) (comEC/celB) [Streptococcus anginosus strain FDAARGOS_1357]
ATGTCACAGTGGATTAAAAGATTTCCGATTAAGCCGATTTACATTGCTTTTTTGCTCGTCTGGTTGTATTTTGCAATCTA
TCAAAGTAGCTGGTTAGGCTGGTTGGGTTTTATCTTTCTGGTGATTTGTCTTTTTCGCTTTTATTCACCGAAAGAATGTT
TCATGACCTTCATGATTCTAATTTGTTTTGCTGGTTTTTTCTTTATTCGTAGGGAAATAGCAGAGCAGAAGACGAAAGTA
GAACCTTCTCCCATAAGACAAGTGGCAGTTCTACCTGACACGATTAAGGTAAATGGTGATTCGCTTTCTTTTCGTGGTAA
AGCTAATGGGCAGACTTATCAAGTTTACTACAAATTGAAATCAAAGGAAGAACAGTTGGCTTTTCAAAATCTCTCTAGTC
TGGTTACATTGACTGTTGAAGGGGAATTTGAAATCCCTGAGAAGAAGCGTAATTTTGCTGGTTTTGATTACCAATCCTAT
TTAAAAACGCAAGGGATTTATCGAATTTTAAAAGTGGATACCATTTTATCGAGCCAAGATAGAATCAGCTTGCACCCTTT
TGAGTGGCTTTCTAGCTGGCGAAGAAAAGCACTGGTATTTATCAAGAACCATTTTCCAAATCCGATGAGTAATTACATGA
CAGGACTCTTATTTGGTGCCTTGGATACATCCTTTGACGAAATGAGCAATCTTTACTCTAGCTTGGGGATTATTCATTTA
TTTGCGCTGTCTGGCATGCAAGTTGGCTTTTTTATGGAGGGTTTTCGTAAGTTGCTGTTAAGGCTGGGTCTTACACAGGA
AATGGTTCATAAATGCCAATATCCATTTTCTTTCTTCTATGCGGGAATGACTGGATTTTCAGTATCCGTTGTACGGAGCT
TAGTTCAGAAATTATTGTCGCAACATGGTATCACTAAGTTAGATAATTTTGCTTTAACGATGATGATATTGTCCTTGATT
ATGCCTTCCTTTCTTTTAACGGCGGGAGGAGTTCTCTCTTGCGCCTATGCTTTTGTTATTAGTGTGATAGATTTTGAAAG
TCTGACTTCTTGGCGAAACATTGTTGTAGAGAGCAGTGTCATTTCGCTTGGTGTTTTACCGATTCTAATCTTTTATTTTG
GTGAATTTCAACCTTGGTCTATTTTGTTGACATTTGTTTTTTCACTGATTTTCGATGCAATGATGTTGCCAGGATTGACG
TTGATTTTTCTTTTTTCGCCTTTGATAAAGCTAACTCAGGTCAATTTTCTATTTGAAGGGTTAGAAAATAGCATTCGTTG
GATAGCAAGTGTCTTTGGCAGACCAATCGTTTTTGGGCAACCCAGTCCGCTTTTGCTGATTGTTATGCTACTTGTACTGG
CTATTTTGTATGATATTAGAAAAAATAAAAAATGGGTAATATTTCTTAGTCTGCTTCTTTCATTACTCTTTTTCATAAAT
AAATTTCCCTTGCAAAATGAGATCACAATGGTTGATGTTGGGCAGGGAGATAGTATTTTTCTGAGAGACTGGAAAGGACG
AAATGTATTGATTGATGTTGGTGGACGTGAGGAAATTAGAACAAAAGAAGCTTGGCAGAAACGAGCAACTGGCTCAAATG
CAGAGAAAACTTTGATTCCTTACTTAAAAAGTCGTGGTGTAGATACGATTGATACTTTAGTCTTAACAAATCCTAATCCA
GATTATGCAGGAGATGTATTAGAAGTTGCTAAAAAATTTGCAATAAAGAAAATTTATATTGCCAGAAGTAGTCTAAGCAA
TGCAGATTTTCTAGAGAAATTAAGGAAAATAAACACATTCATTCATGTTGTAAAACAAGGCGACAAACTTCCTATTTTTG
ATCATCATTTGAAAGTTCTTTCGAGTGCTAGCAAGAACGACCATTCGATTGTTTTATATGGTCGGTTTTTCCGTACAAGA
TTTTTATTTGCGAGCGACTTGAAAGAAGAGGGCGAAGCAAAGTTAATGCAGCATTATCCAAAGTTGAAAACAGATGTTTT
GAAAGTCGGACAGCATGGAGCCAAAAATTCATCACATTCAAAGTTTTTACAGCAAATAGAGCCCGCAGTTGCGCTCATTT
CTGTTGGGAAAAATAATCAATCTAAGCAACCAAGTCAAGATACAATAGAGCGATTTGCACAATTGCCTGCTAAAGTCTAT
CGGACAGATGAACAAGGGGCAGTTAAATTTTCAGGGTGGACAAACTGGCGATTAGAGATGGTCAAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEC/celB Streptococcus mitis SK321

55.154

100

0.555

  comEC/celB Streptococcus mitis NCTC 12261

54.558

100

0.549

  comEC/celB Streptococcus pneumoniae TIGR4

54.083

100

0.544

  comEC/celB Streptococcus pneumoniae Rx1

53.28

100

0.536

  comEC/celB Streptococcus pneumoniae D39

53.28

100

0.536

  comEC/celB Streptococcus pneumoniae R6

53.28

100

0.536

  comEC Lactococcus lactis subsp. cremoris KW2

47.043

100

0.472