Detailed information NTG0535868

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: JN756_RS31055
• Genome accession: NZ_CP069594
• Coordinates: 6782410..6783906 (+)
• Length: 498 a.a.
• NCBI ID: WP_201021637.1
• Uniprot ID: -
• Organism: Pseudomonas sp. Y39-6
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 6777410..6788906

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JN756_RS31025 (JN756_30830)	-	6777922..6778617 (+)	696	WP_046381664.1	HAD-IA family hydrolase	-
JN756_RS31030 (JN756_30835)	sutA	6778732..6779058 (-)	327	WP_017845175.1	transcriptional regulator SutA	-
JN756_RS31035 (JN756_30840)	-	6779162..6779587 (-)	426	WP_017845176.1	secondary thiamine-phosphate synthase enzyme YjbQ	-
JN756_RS31040 (JN756_30845)	-	6779800..6781137 (-)	1338	WP_057004005.1	ammonium transporter	-
JN756_RS31045 (JN756_30850)	glnK	6781171..6781509 (-)	339	WP_002555808.1	P-II family nitrogen regulator	-
JN756_RS31050 (JN756_30855)	-	6781932..6782195 (+)	264	WP_017845178.1	accessory factor UbiK family protein	-
JN756_RS31055 (JN756_30860)	comM	6782410..6783906 (+)	1497	WP_201021637.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
JN756_RS31060 (JN756_30865)	-	6784034..6784924 (-)	891	WP_236255063.1	LysR family transcriptional regulator	-
JN756_RS31065 (JN756_30870)	-	6785186..6786052 (-)	867	WP_201021639.1	DMT family transporter	-
JN756_RS31070 (JN756_30875)	-	6786137..6787390 (-)	1254	WP_201021640.1	cation:proton antiporter	-
JN756_RS31075 (JN756_30880)	-	6787466..6788575 (-)	1110	WP_201021641.1	ATP-grasp domain-containing protein	-

Sequence

Protein

• Length: 498 a.a.
• Molecular weight: 53365.53 Da
• Isoelectric Point: 8.2698

>NTDB_id=535868 JN756_RS31055 WP_201021637.1 6782410..6783906(+) (comM) [Pseudomonas sp. Y39-6]
MSLAIVHSRAQIGVEAPAVSVEVHMANGLPSLTLVGLPETAVKESKDRVRSAILNSALQYPSRRITLNLAPADLPKDGGR
FDLAIALGILAASVQVPTQMLDDVECLGELALSGEVRAVKGVLPAALAARKAGRSVIVPRANAEEACLASGLKVIAVDHL
LQVVAHLNGHVPIEPFKSDGLLYLNKPYPDLSEVQGQLAAKRALLIAAAGAHNLLFSGPPGTGKTLLASRLPGLLPPLSE
HEALEVAAIQSVVSLAPLSHWPHRPFRQPHHSASGPALVGGGSKPQPGEITLAHHGVLFLDELPEFDRKVLEVLREPLES
GHIVISRARDRVSFPARFQLVAAMNPCPCGYMGDPSARCRCTPEQVQRYRNKLSGPLLDRIDLHLTVAREITALNPAPQP
GDNTSTASALVAQARDRQQQRQGCANAFLDLPGLREHCALSRPDEAWLESACERLTLSLRAAHRLLKVARTLADLEQGQR
IARHHLAEALQYRPAPST

Nucleotide

• Length: 1497 bp

>NTDB_id=535868 JN756_RS31055 WP_201021637.1 6782410..6783906(+) (comM) [Pseudomonas sp. Y39-6]
ATGTCCCTCGCCATCGTCCACAGTCGCGCCCAGATCGGCGTCGAAGCCCCTGCCGTCAGCGTCGAAGTACACATGGCCAA
TGGTCTGCCATCGCTCACCCTGGTGGGCTTGCCGGAAACCGCCGTCAAGGAAAGCAAGGACCGCGTGCGCAGTGCCATCC
TCAACTCCGCGCTGCAATACCCGTCCCGCCGCATCACCCTCAACCTCGCGCCCGCCGACCTGCCCAAGGACGGCGGGCGT
TTTGACCTGGCGATAGCCCTCGGGATTCTCGCGGCGAGCGTGCAGGTGCCGACGCAGATGCTCGACGACGTGGAATGCCT
GGGGGAATTGGCGCTATCGGGCGAGGTACGCGCAGTGAAAGGTGTGTTGCCGGCAGCGCTCGCGGCGCGCAAGGCCGGGC
GCAGCGTGATCGTGCCCCGGGCGAATGCCGAAGAGGCCTGCCTGGCATCGGGGTTGAAGGTGATTGCGGTGGACCACCTG
CTACAGGTGGTGGCGCACCTGAATGGGCATGTGCCGATCGAGCCCTTCAAGTCCGACGGTCTGCTGTACTTGAACAAACC
TTACCCGGACCTCAGCGAAGTCCAGGGCCAACTCGCCGCCAAACGCGCACTGCTGATCGCTGCGGCAGGCGCGCATAACC
TGTTGTTCAGCGGCCCGCCCGGCACCGGCAAGACCTTGCTCGCCAGCCGCCTGCCGGGTTTGCTGCCGCCGCTGAGTGAG
CACGAAGCGCTGGAAGTGGCAGCGATTCAATCAGTGGTCAGCCTGGCGCCCCTGAGTCATTGGCCCCATCGGCCGTTTCG
CCAGCCGCACCATTCGGCCTCCGGCCCGGCGCTGGTGGGTGGAGGGTCAAAGCCGCAACCGGGGGAAATCACCTTGGCCC
ACCATGGGGTGCTGTTCCTGGATGAGCTGCCGGAGTTTGATCGCAAGGTGCTCGAGGTTTTGCGCGAGCCACTGGAGTCG
GGGCATATCGTGATCTCCCGCGCCCGCGACCGCGTGAGTTTCCCGGCGCGCTTTCAACTGGTCGCCGCAATGAACCCCTG
CCCTTGCGGTTACATGGGCGACCCCAGCGCGCGCTGTCGCTGTACGCCGGAGCAGGTCCAGCGCTATCGCAACAAACTCT
CCGGGCCGTTGCTGGACCGGATCGACCTGCACCTGACCGTCGCTCGCGAAATCACCGCGCTGAACCCGGCCCCGCAGCCC
GGCGACAACACGTCCACCGCCTCGGCACTGGTAGCCCAGGCCCGGGACCGCCAGCAACAGCGCCAGGGCTGCGCCAATGC
GTTCCTCGACCTACCGGGGTTACGCGAGCATTGCGCGCTGTCGAGGCCGGATGAAGCCTGGCTGGAAAGCGCCTGCGAGC
GCCTGACCCTGTCCCTTCGCGCGGCCCACCGCCTGCTCAAGGTCGCCCGCACGCTGGCGGATCTGGAGCAAGGACAAAGA
ATTGCTCGTCATCATCTGGCGGAGGCATTGCAGTACCGACCAGCGCCCTCCACCTGA

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (190-389)

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (403-493)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio campbellii strain DS40M4	55.96	99.398	0.556
comM	Glaesserella parasuis strain SC1401	55.09	100	0.554
comM	Vibrio cholerae strain A1552	55.354	99.398	0.55
comM	Haemophilus influenzae Rd KW20	53.8	100	0.54
comM	Legionella pneumophila str. Paris	50.806	99.598	0.506
comM	Legionella pneumophila strain ERS1305867	50.806	99.598	0.506
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	46.23	100	0.468