Detailed information NTG0534733

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: I6K04_RS12050
• Genome accession: NZ_CP069442
• Coordinates: 2601108..2602610 (-)
• Length: 500 a.a.
• NCBI ID: WP_204086446.1
• Uniprot ID: -
• Organism: Chromobacterium violaceum strain FDAARGOS_1274
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 2596108..2607610

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6K04_RS12030 (I6K04_12030)	cyoA	2597729..2598670 (-)	942	WP_011137543.1	ubiquinol oxidase subunit II	-
I6K04_RS12040 (I6K04_12040)	-	2599647..2600258 (-)	612	WP_011137545.1	thiol:disulfide interchange protein DsbA/DsbL	-
I6K04_RS12045 (I6K04_12045)	-	2600290..2601042 (-)	753	WP_076227912.1	SPOR domain-containing protein	-
I6K04_RS12050 (I6K04_12050)	comM	2601108..2602610 (-)	1503	WP_204086446.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
I6K04_RS12055 (I6K04_12055)	-	2602616..2602903 (-)	288	WP_011137548.1	accessory factor UbiK family protein	-
I6K04_RS12060 (I6K04_12060)	glnK	2603211..2603549 (+)	339	WP_011137549.1	P-II family nitrogen regulator	-
I6K04_RS12065 (I6K04_12065)	-	2603577..2604887 (+)	1311	WP_081527271.1	ammonium transporter	-
I6K04_RS12070 (I6K04_12070)	-	2605004..2605432 (-)	429	WP_011137551.1	ClpXP protease specificity-enhancing factor	-
I6K04_RS12075 (I6K04_12075)	-	2605442..2606044 (-)	603	WP_011137552.1	glutathione S-transferase N-terminal domain-containing protein	-
I6K04_RS12080 (I6K04_12080)	-	2606196..2606960 (-)	765	WP_011137553.1	cytochrome c1	-

Sequence

Protein

• Length: 500 a.a.
• Molecular weight: 52779.45 Da
• Isoelectric Point: 7.3128

>NTDB_id=534733 I6K04_RS12050 WP_204086446.1 2601108..2602610(-) (comM) [Chromobacterium violaceum strain FDAARGOS_1274]
MTLAVVASRALSGLDAPEVAVEVHLANGLPAFNIVGLPDTEVKESRDRVRAAILTSGFEFPARKITVNLAPADLPKDSGR
FDLPIAIGILLASGQVKNDDIARFEFAGELALSGAVRPVRGALAMACQCHAAGRAFVLPADSAGEAAVVGGAAVYAVESL
PQACAFLNGLQPLEPFAGTIGGEWPNYPDLADVKGQSIARGALEIAAAGGHSLLLMGPPGTGKSMLAARLPGLLPPLSET
EALESAAVQSLGSQGFQPGRWRVRPFRSPHHTASAVALVGGGSEPRPGEISLAHHGVLFLDELPEFDRKVLEVLREPLES
GMIHISRAARQASFPARFQLVAAMNPCPCGYHGHPSGRCQCTPEQVARYRGKISGPLLDRIDLQVEVPALTADELQRSAA
GEASESVRHRVLTARDRQLARQGALNAALQGAELERHCLGDEQALAVLAKALQQLGLSARAYHRILRVSRTIADLQGAET
INRNHVLQAIQLRRVMQSGA

Nucleotide

• Length: 1503 bp

>NTDB_id=534733 I6K04_RS12050 WP_204086446.1 2601108..2602610(-) (comM) [Chromobacterium violaceum strain FDAARGOS_1274]
ATGACGCTGGCGGTGGTGGCGAGCAGGGCGTTGTCCGGGCTTGACGCCCCGGAGGTGGCCGTCGAGGTCCACCTGGCCAA
CGGCCTGCCCGCGTTCAACATCGTCGGCCTGCCCGACACCGAGGTGAAGGAAAGCCGCGATCGCGTCCGCGCCGCCATTC
TCACCTCGGGCTTCGAATTTCCCGCCCGCAAGATCACCGTCAACCTCGCTCCGGCCGACCTCCCCAAGGACTCCGGCCGC
TTCGACCTCCCCATCGCCATTGGCATCCTGCTGGCTTCCGGCCAGGTGAAGAACGACGACATCGCCCGTTTCGAATTCGC
CGGCGAGCTGGCGCTCAGCGGCGCGGTGCGCCCGGTGCGCGGCGCCTTGGCGATGGCCTGCCAGTGCCACGCCGCCGGTC
GCGCTTTCGTGCTGCCTGCCGACAGCGCCGGCGAGGCGGCGGTGGTCGGCGGCGCCGCCGTCTACGCGGTGGAGTCCTTG
CCGCAGGCGTGCGCCTTTCTGAACGGTTTGCAGCCGTTGGAACCGTTCGCCGGCACCATCGGCGGCGAGTGGCCGAACTA
TCCCGATCTGGCCGATGTCAAAGGCCAGTCCATCGCCCGCGGGGCTTTGGAAATCGCCGCGGCAGGTGGACACAGCTTGT
TGCTGATGGGGCCGCCGGGCACCGGCAAGTCCATGCTGGCGGCCAGGCTGCCCGGCCTGCTGCCGCCGTTGTCCGAAACA
GAGGCGCTGGAGAGCGCGGCGGTGCAGTCGCTGGGTTCGCAAGGCTTCCAGCCCGGCCGCTGGCGGGTGCGCCCGTTCAG
GTCGCCCCATCACACCGCTTCCGCGGTGGCGCTGGTCGGCGGCGGCAGTGAGCCGAGGCCGGGCGAGATCAGCCTGGCGC
ATCACGGCGTGCTGTTTCTCGACGAATTGCCGGAGTTCGACCGCAAGGTGCTGGAAGTGCTGCGCGAGCCGCTCGAGAGC
GGGATGATCCATATTTCGCGGGCGGCGAGGCAGGCCAGCTTCCCGGCGCGTTTCCAGCTGGTGGCGGCGATGAATCCCTG
CCCCTGCGGCTACCACGGCCATCCGTCCGGGCGCTGTCAGTGCACTCCCGAGCAGGTGGCGAGATATCGAGGTAAAATCT
CCGGCCCTTTGCTGGACCGCATCGATTTGCAGGTGGAAGTGCCGGCGCTGACCGCGGACGAGCTGCAGCGGTCCGCTGCG
GGGGAGGCCAGCGAGTCGGTGCGCCATCGGGTGCTGACGGCGCGCGATCGCCAGTTGGCGCGGCAGGGCGCGCTGAATGC
GGCATTGCAGGGCGCGGAGCTGGAGCGGCATTGCCTCGGCGACGAGCAGGCGCTGGCGGTGCTGGCCAAGGCATTGCAAC
AACTTGGCTTGTCGGCGCGCGCGTATCATCGGATACTGCGGGTTTCGCGCACCATCGCCGATTTGCAGGGCGCGGAAACG
ATAAACCGCAACCATGTATTGCAGGCGATCCAGCTCAGGCGCGTCATGCAGAGCGGCGCTTGA

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (401-493)

• Subunit ChlI of Mg-chelatase (ChlI) (21-141)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (189-394)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	53.333	99	0.528
comM	Haemophilus influenzae Rd KW20	51.575	100	0.524
comM	Glaesserella parasuis strain SC1401	51.896	100	0.52
comM	Vibrio campbellii strain DS40M4	52.525	99	0.52
comM	Legionella pneumophila str. Paris	50.992	100	0.514
comM	Legionella pneumophila strain ERS1305867	50.992	100	0.514
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	46.414	100	0.466