Detailed information NTG0053396

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: C269_RS00170
• Genome accession: NC_018631
• Coordinates: 32928..35081 (+)
• Length: 717 a.a.
• NCBI ID: WP_010015511.1
• Uniprot ID: -
• Organism: Leuconostoc gelidum JB7
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 27928..40081

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C269_RS00135 (C269_00135)	-	28335..29075 (-)	741	WP_010015502.1	helix-turn-helix domain-containing protein	-
C269_RS09590	-	29228..29548 (-)	321	WP_224156800.1	hypothetical protein	-
C269_RS00140	-	29490..29987 (-)	498	WP_238524879.1	cyclase family protein	-
C269_RS00150 (C269_00155)	-	30600..30860 (+)	261	WP_010015505.1	helix-turn-helix domain-containing protein	-
C269_RS09275	-	31020..31166 (+)	147	WP_010015506.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
C269_RS09480	-	31328..31492 (+)	165	WP_010015508.1	hypothetical protein	-
C269_RS00160 (C269_00165)	-	31918..32295 (-)	378	WP_010015509.1	IS3 family transposase	-
C269_RS00165 (C269_00170)	-	32353..32604 (-)	252	WP_010015510.1	transposase	-
C269_RS00170 (C269_00175)	comA	32928..35081 (+)	2154	WP_010015511.1	peptide cleavage/export ABC transporter	Regulator
C269_RS00175 (C269_00180)	-	35096..36472 (+)	1377	WP_010015513.1	bacteriocin secretion accessory protein	-
C269_RS00180 (C269_00185)	-	36465..36728 (+)	264	WP_010015515.1	helix-turn-helix transcriptional regulator	-
C269_RS00185 (C269_00190)	-	36796..36978 (+)	183	WP_010015516.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
C269_RS09280	-	36997..37152 (+)	156	WP_010015517.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
C269_RS00190 (C269_00195)	-	37761..38204 (-)	444	WP_010015518.1	type II CAAX prenyl endopeptidase Rce1 family protein	-

Sequence

Protein

• Length: 717 a.a.
• Molecular weight: 79536.72 Da
• Isoelectric Point: 6.5142

>NTDB_id=53396 C269_RS00170 WP_010015511.1 32928..35081(+) (comA) [Leuconostoc gelidum JB7]
MFIKKINYIPQVDERDCGVAALAMIMAHYNTRMSLAQLREMAKTDMEGTTALGIVKAAQALDFDTMPVQADLSMFDKKDL
PYPFIAHVQKDGKYPHYYVVYGMKGKNLLIADPDITVGRTKMAKSYFVNEWTGVAIFIAPNPTYKPTKDKKRSLSSFIPV
IGKQRGLVINIVIAALMVTLVSILGSYYLQGIIDTYIPDNMKSTLGIVSVGLIVAYVIQQMLSYARDYLLIIMGQRLSID
IILSYIRHIFELPMSFFATRRTGEIISRFTDANSIIEALASTMLSLFLDVGILVIVGTVLVIQNPTLFFISLVAVPAYSL
VIWLFMKPFSKMNNDQMQAGSMLSASIIEDINGVETIKALNSEQVAYKKVDHEFVTYLDKSFIYAKTEAVQNALKSLLHL
ILNVLVLWVGAQLVMANKISMGQLITYNALLGFFTDPLQNIINLQTKLQQASVANNRLNEVYLVESEYKESSALSERIAD
ASDIIMTQVTYKYGFGAPAIDDVSLQIGQGEKIALVGVSGSGKSTLVKLLVNFFHPESGTIMLGNSTLENIDKHELRAHI
NYLPQEPYIFTGSIIENLMLGAKPSTTQADIIRATELAEIKIDIENMSQGFSTELAESGNISGGQKQRIALARALLVDSP
VLILDESTSNLDVLTEKKIIDNLMKLTDKTIIFVAHRLSISKRVDRIITMQNGHVIEDGSHVTLLSQNGFYASLYQD

Nucleotide

• Length: 2154 bp

>NTDB_id=53396 C269_RS00170 WP_010015511.1 32928..35081(+) (comA) [Leuconostoc gelidum JB7]
ATGTTTATCAAAAAAATTAATTATATTCCGCAAGTTGATGAACGTGATTGTGGTGTTGCAGCGTTAGCCATGATCATGGC
GCATTATAATACACGAATGTCATTAGCACAGTTACGTGAAATGGCCAAGACAGACATGGAGGGAACGACAGCATTAGGAA
TTGTTAAGGCAGCACAAGCGCTTGACTTCGATACAATGCCAGTTCAGGCAGATCTATCTATGTTTGATAAGAAAGACTTA
CCTTATCCGTTTATTGCACATGTTCAAAAAGATGGCAAGTATCCACATTATTACGTTGTTTATGGTATGAAAGGAAAAAA
TCTATTAATTGCTGATCCTGATATTACCGTTGGTAGGACTAAAATGGCAAAATCCTATTTTGTTAATGAATGGACTGGTG
TAGCCATATTTATTGCTCCCAATCCAACTTATAAACCAACCAAAGATAAGAAACGTTCGTTAAGCTCTTTTATACCGGTT
ATCGGTAAGCAACGTGGATTGGTGATTAATATTGTGATCGCAGCACTTATGGTGACTTTGGTCAGTATTTTAGGATCATA
TTATTTGCAGGGAATTATTGATACCTATATACCAGATAATATGAAGAGCACGCTGGGCATTGTGTCTGTCGGTTTAATTG
TAGCCTATGTGATACAGCAGATGTTGTCATATGCCAGAGATTACTTATTAATTATCATGGGTCAACGATTATCAATTGAC
ATTATTCTGTCCTATATTAGGCATATTTTTGAATTACCAATGTCTTTTTTTGCAACAAGACGGACCGGCGAAATTATTAG
CCGTTTCACTGATGCGAATTCTATTATCGAAGCTTTAGCCAGTACAATGCTGTCCTTATTTTTAGACGTTGGTATATTAG
TTATAGTCGGAACAGTGTTAGTGATTCAAAATCCAACGTTGTTTTTTATCTCATTAGTAGCAGTACCAGCTTATTCTTTA
GTGATATGGCTCTTTATGAAGCCATTTTCTAAGATGAACAACGATCAAATGCAAGCCGGATCAATGTTGAGCGCCTCAAT
CATCGAAGACATTAATGGTGTCGAAACAATTAAGGCGTTGAACAGTGAACAAGTTGCGTATAAAAAAGTAGATCATGAAT
TTGTCACGTATTTGGATAAATCATTTATCTATGCAAAAACTGAAGCAGTTCAAAATGCACTCAAAAGTTTATTGCACTTG
ATTTTGAATGTTTTAGTACTTTGGGTTGGCGCACAATTAGTTATGGCTAACAAAATAAGCATGGGTCAGTTGATCACATA
TAATGCTTTGCTTGGATTTTTTACAGATCCACTACAAAACATTATCAACTTACAAACTAAGTTGCAACAAGCTTCAGTTG
CTAATAATCGTTTAAACGAAGTGTATTTAGTTGAGTCAGAATATAAAGAATCGTCAGCATTAAGTGAAAGAATTGCAGAT
GCTAGTGATATCATTATGACACAAGTAACTTATAAATACGGCTTTGGTGCACCTGCGATTGATGACGTGTCACTTCAAAT
TGGGCAAGGTGAAAAAATTGCTTTAGTTGGTGTGAGTGGTTCGGGGAAATCGACGTTAGTGAAGTTGTTAGTTAATTTTT
TTCACCCAGAATCTGGCACAATTATGCTAGGCAACAGTACGTTAGAAAATATTGATAAACATGAACTACGTGCGCATATT
AATTACCTCCCACAAGAACCATATATTTTTACGGGTTCAATTATTGAAAATTTGATGTTAGGTGCGAAGCCTAGTACAAC
ACAAGCAGATATTATACGCGCAACTGAATTAGCTGAAATTAAAATTGATATTGAAAACATGTCACAAGGATTTAGTACAG
AATTAGCTGAGAGTGGGAATATTTCAGGTGGTCAAAAGCAGCGGATTGCTTTAGCACGGGCTCTGCTTGTTGATTCACCC
GTCTTAATTCTTGATGAATCGACTAGTAATTTAGATGTGTTAACTGAAAAGAAAATTATTGATAATTTAATGAAGTTAAC
GGATAAAACGATTATTTTTGTGGCACATCGCTTATCGATTTCTAAACGTGTTGATCGTATTATAACTATGCAAAATGGTC
ATGTTATTGAAGATGGTAGTCATGTCACATTATTATCACAAAATGGTTTTTACGCGTCATTATATCAAGATTGA

Domains

Predicted by InterproScan.

• Peptidase C39 family (Peptidase_C39) (6-142)

• ABC transporter transmembrane region (ABC_membrane) (168-438)

• ABC transporter (ABC_tran) (501-649)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus mitis NCTC 12261	60.14	99.721	0.6
comA	Streptococcus mitis SK321	59.72	99.721	0.596
comA	Streptococcus gordonii str. Challis substr. CH1	59.72	99.721	0.596
comA	Streptococcus pneumoniae Rx1	59.441	99.721	0.593
comA	Streptococcus pneumoniae D39	59.441	99.721	0.593
comA	Streptococcus pneumoniae R6	59.441	99.721	0.593
comA	Streptococcus pneumoniae TIGR4	59.301	99.721	0.591
comA/nlmT	Streptococcus mutans UA159	57.567	98.605	0.568