Detailed information NTG0533479

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: JQC68_RS11290
• Genome accession: NZ_CP069308
• Coordinates: 2250951..2252078 (+)
• Length: 375 a.a.
• NCBI ID: WP_203399104.1
• Uniprot ID: -
• Organism: Glaesserella parasuis strain EHP1804
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 2245951..2257078

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JQC68_RS11255 (JQC68_11250)	-	2246212..2246487 (+)	276	WP_075630739.1	type II toxin-antitoxin system RelE family toxin	-
JQC68_RS11260 (JQC68_11255)	-	2246526..2246906 (+)	381	WP_075630738.1	helix-turn-helix domain-containing protein	-
JQC68_RS11265 (JQC68_11260)	-	2247556..2248224 (-)	669	WP_203399103.1	hypothetical protein	-
JQC68_RS11270 (JQC68_11265)	-	2248205..2248348 (-)	144	WP_005712666.1	hypothetical protein	-
JQC68_RS11275 (JQC68_11270)	rfaD	2248440..2249366 (-)	927	WP_021110191.1	ADP-glyceromanno-heptose 6-epimerase	-
JQC68_RS11280 (JQC68_11275)	def	2249378..2249890 (-)	513	WP_005712670.1	peptide deformylase	-
JQC68_RS11285 (JQC68_11280)	-	2250108..2250926 (+)	819	WP_021110190.1	Bro-N domain-containing protein	-
JQC68_RS11290 (JQC68_11285)	dprA	2250951..2252078 (+)	1128	WP_203399104.1	DNA-processing protein DprA	Machinery gene
JQC68_RS11295 (JQC68_11290)	-	2252131..2252967 (+)	837	WP_203399105.1	heme/hemin ABC transporter substrate-binding protein	-
JQC68_RS11300 (JQC68_11295)	-	2252967..2253953 (+)	987	WP_203399106.1	FecCD family ABC transporter permease	-
JQC68_RS11305 (JQC68_11300)	-	2253953..2254741 (+)	789	WP_010787335.1	heme ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 41746.83 Da
• Isoelectric Point: 5.5989

>NTDB_id=533479 JQC68_RS11290 WP_203399104.1 2250951..2252078(+) (dprA) [Glaesserella parasuis strain EHP1804]
MTHLTKLLALLQVPQLGAQRIGRLLSEVDFGEFCQYDKTALKQMGWNERQIQRWFNPEHKWIDQVLQWAEQDQQRILTLF
DEDYPFLLKQISTAPPVLFVRGNVESLSLPQIAIVGSRDYSHYGEHWAGHFSAELVKHQLAVTSGLAIGIDGFCHQRAVN
ENGITIAVLGSGLDQVYPARHKKLAEQIVETSGALVSEFFPSQPPIAENFPRRNRIISGLSLGTLVIEATVNSGSLITAR
YALEQGREVFALPNAVQNPYSEGCHKLIKEGALLVENIDDILEAIAWQRQSVHIQPNLFDTKPKQAVKSTPKLAKNLPEL
TACQQQLFEQISLEPISVDDLAKATDMAVETALIELLNLELLGVVKQVSGGYVIT

Nucleotide

• Length: 1128 bp

>NTDB_id=533479 JQC68_RS11290 WP_203399104.1 2250951..2252078(+) (dprA) [Glaesserella parasuis strain EHP1804]
ATGACACATCTCACAAAATTATTAGCCCTGTTACAAGTGCCACAGCTTGGCGCGCAACGTATCGGGCGGTTACTCTCGGA
AGTGGACTTTGGCGAATTTTGTCAATATGACAAAACCGCATTAAAGCAAATGGGCTGGAATGAACGGCAAATTCAGCGTT
GGTTTAATCCTGAGCATAAATGGATTGATCAGGTGTTGCAATGGGCGGAACAGGATCAGCAACGGATTTTAACCTTATTT
GACGAAGATTATCCTTTTTTATTGAAGCAGATCAGTACTGCTCCCCCTGTGCTTTTTGTGCGTGGGAATGTTGAAAGTTT
ATCGTTACCGCAGATAGCCATCGTTGGCAGTCGAGATTATTCCCACTATGGCGAACACTGGGCAGGGCATTTTTCGGCGG
AATTAGTGAAACATCAACTTGCTGTCACTAGTGGTTTAGCCATAGGCATAGACGGATTTTGTCATCAGCGTGCGGTCAAT
GAAAACGGGATTACTATTGCGGTTTTAGGCAGTGGTTTAGACCAAGTTTACCCTGCTCGCCACAAAAAACTTGCTGAACA
AATCGTTGAAACAAGCGGTGCGTTAGTGTCGGAATTTTTCCCTAGCCAGCCACCGATTGCTGAGAATTTTCCTAGACGAA
ATCGTATTATCAGCGGATTATCGCTCGGAACATTGGTTATTGAAGCAACAGTGAATAGTGGCTCGCTCATTACTGCCCGT
TATGCGTTAGAGCAAGGGAGAGAAGTCTTTGCATTGCCGAACGCAGTTCAAAACCCATATAGCGAAGGGTGCCATAAATT
GATTAAAGAAGGGGCATTACTGGTTGAAAATATTGACGACATTTTAGAAGCGATTGCGTGGCAACGGCAATCAGTGCATA
TTCAACCAAACCTGTTTGATACGAAACCTAAACAAGCGGTGAAATCTACCCCAAAATTGGCAAAAAACCTACCTGAACTG
ACCGCTTGTCAGCAACAATTGTTTGAACAGATTAGCCTTGAGCCGATCAGCGTTGATGATCTTGCCAAAGCAACAGATAT
GGCGGTAGAAACCGCATTAATTGAGCTGTTAAATTTGGAGTTGTTGGGTGTTGTGAAGCAGGTGAGTGGGGGGTATGTAA
TCACTTGA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (314-371)

• DNA recombination-mediator protein A (DNA_processg_A) (69-276)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Glaesserella parasuis strain SC1401	97.333	100	0.973
dprA	Haemophilus influenzae Rd KW20	52.941	90.667	0.48
dprA	Vibrio campbellii strain DS40M4	46.917	99.467	0.467
dprA	Vibrio cholerae strain A1552	43.883	100	0.44
dprA	Legionella pneumophila strain ERS1305867	38.36	100	0.387
dprA	Neisseria gonorrhoeae MS11	43.312	83.733	0.363