Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   JOA01_RS07875 Genome accession   NZ_CP069079
Coordinates   1549123..1549839 (-) Length   238 a.a.
NCBI ID   WP_217374213.1    Uniprot ID   -
Organism   Streptococcus parasuis strain BS26     
Function   degradation of ComW (predicted from homology)   
Competence regulation

Genomic Context

Location: 1544123..1554839
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JOA01_RS07855 (JOA01_07860) - 1544487..1545713 (-) 1227 WP_217374210.1 cysteine desulfurase -
  JOA01_RS07860 (JOA01_07865) sufD 1545718..1546980 (-) 1263 WP_217374211.1 Fe-S cluster assembly protein SufD -
  JOA01_RS07865 (JOA01_07870) sufC 1546997..1547770 (-) 774 WP_171989104.1 Fe-S cluster assembly ATPase SufC -
  JOA01_RS07870 (JOA01_07875) - 1547942..1549126 (-) 1185 WP_217374212.1 glycosyltransferase family 4 protein -
  JOA01_RS07875 (JOA01_07880) mecA 1549123..1549839 (-) 717 WP_217374213.1 adaptor protein MecA Regulator
  JOA01_RS07880 (JOA01_07885) - 1550045..1550884 (-) 840 WP_217375187.1 undecaprenyl-diphosphate phosphatase -
  JOA01_RS07885 (JOA01_07890) - 1551160..1552722 (+) 1563 WP_217374214.1 ABC transporter substrate-binding protein/permease -
  JOA01_RS07890 (JOA01_07895) - 1552715..1553458 (+) 744 WP_130554708.1 amino acid ABC transporter ATP-binding protein -
  JOA01_RS07895 (JOA01_07900) - 1553568..1553777 (-) 210 WP_024391394.1 hypothetical protein -
  JOA01_RS07900 (JOA01_07905) - 1553867..1554769 (-) 903 WP_217374215.1 SPFH domain-containing protein -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27849.50 Da        Isoelectric Point: 4.1340

>NTDB_id=532183 JOA01_RS07875 WP_217374213.1 1549123..1549839(-) (mecA) [Streptococcus parasuis strain BS26]
MKVKQISDSTLKITIQLEDLEERGMEIADFLIPQEKTEEFFYTVLDELDLPMTFRESGMLSFRVTPKPDKVDIFVTKSEM
DQSLNFDEFTDLSELGDVSRMTPDELLKSLERTVRERSTHDSKAVRLLEDAEKEDSDEYQEQYIYYILEFPALIDAVNFV
QTVDYPVEESELYKVEQTYYMTVLINVAERSKQYPEYILSRMLEFTNDTKLTRPFLQEHGILVLGNGAIDELKKVQTV

Nucleotide


Download         Length: 717 bp        

>NTDB_id=532183 JOA01_RS07875 WP_217374213.1 1549123..1549839(-) (mecA) [Streptococcus parasuis strain BS26]
ATGAAAGTAAAACAAATAAGTGATTCGACTCTAAAAATCACTATCCAATTAGAAGATTTAGAGGAGCGCGGGATGGAAAT
TGCGGATTTCCTTATCCCTCAAGAAAAGACGGAAGAGTTTTTTTATACAGTATTGGATGAATTGGATTTGCCAATGACTT
TCCGAGAAAGTGGAATGCTTAGTTTTAGAGTTACTCCAAAACCGGATAAAGTGGATATTTTTGTCACAAAATCTGAAATG
GATCAAAGTTTAAATTTTGATGAATTTACAGATTTATCGGAATTAGGCGATGTATCAAGAATGACTCCAGATGAATTGCT
GAAAAGTTTGGAACGTACAGTTCGTGAACGAAGCACGCATGACTCAAAAGCAGTTCGTCTATTAGAAGATGCTGAAAAAG
AAGATAGTGATGAATACCAAGAACAATATATTTACTATATCTTAGAATTTCCTGCTTTGATTGATGCGGTAAATTTTGTT
CAAACAGTGGATTATCCAGTTGAAGAATCTGAGCTCTACAAGGTGGAACAAACCTATTATATGACAGTATTGATTAATGT
TGCAGAGCGTTCAAAGCAGTATCCGGAGTATATTCTATCTCGCATGCTTGAATTTACAAACGATACCAAATTGACACGAC
CATTTCTTCAAGAGCACGGAATCTTGGTGTTGGGAAATGGGGCCATTGATGAGTTGAAAAAGGTGCAAACGGTATGA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-232)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Streptococcus pneumoniae TIGR4

49.18

100

0.504
  mecA Streptococcus pneumoniae D39

49.18

100

0.504
  mecA Streptococcus pneumoniae R6

49.18

100

0.504
  mecA Streptococcus pneumoniae Rx1

49.18

100

0.504
  mecA Streptococcus mutans UA159

47.951

100

0.492
  mecA Streptococcus thermophilus LMD-9

45.714

100

0.471
  mecA Streptococcus thermophilus LMG 18311

45.306

100

0.466