Detailed information NTG0532183

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: LAJ62_RS18065
• Genome accession: NZ_CP083410
• Coordinates: 3702727..3703710 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain RP437
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3697727..3708710

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LAJ62_RS18040 (LAJ62_18000)	bcsF	3697888..3698079 (+)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-
LAJ62_RS18045 (LAJ62_18005)	bcsG	3698076..3699755 (+)	1680	WP_000191622.1	cellulose biosynthesis protein BcsG	-
LAJ62_RS18050 (LAJ62_18010)	ldrD	3699842..3699949 (-)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
LAJ62_RS18055 (LAJ62_18015)	yhjV	3700425..3701696 (+)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
LAJ62_RS18060 (LAJ62_18020)	dppF	3701726..3702730 (-)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
LAJ62_RS18065 (LAJ62_18025)	amiE	3702727..3703710 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
LAJ62_RS18070 (LAJ62_18030)	dppC	3703721..3704623 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
LAJ62_RS18075 (LAJ62_18035)	dppB	3704633..3705652 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
LAJ62_RS18080 (LAJ62_18040)	dppA	3705960..3707567 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=532183 LAJ62_RS18065 WP_001196486.1 3702727..3703710(-) (amiE) [Escherichia coli strain RP437]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=532183 LAJ62_RS18065 WP_001196486.1 3702727..3703710(-) (amiE) [Escherichia coli strain RP437]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404