Detailed information NTG0532177

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: JOA01_RS06000
• Genome accession: NZ_CP069079
• Coordinates: 1182742..1183680 (-)
• Length: 312 a.a.
• NCBI ID: WP_217373927.1
• Uniprot ID: -
• Organism: Streptococcus parasuis strain BS26
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1177742..1188680

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JOA01_RS05975 (JOA01_05980)	prsA	1177985..1179001 (-)	1017	WP_217373922.1	peptidylprolyl isomerase PrsA	-
JOA01_RS05980 (JOA01_05985)	-	1179064..1179783 (-)	720	WP_217373923.1	O-methyltransferase	-
JOA01_RS05985 (JOA01_05990)	-	1179858..1180406 (-)	549	WP_217373924.1	DUF6630 family protein	-
JOA01_RS05990 (JOA01_05995)	-	1180419..1180865 (-)	447	WP_217373925.1	hypothetical protein	-
JOA01_RS05995 (JOA01_06000)	pepF	1180867..1182669 (-)	1803	WP_217373926.1	oligoendopeptidase F	Regulator
JOA01_RS06000 (JOA01_06005)	coiA	1182742..1183680 (-)	939	WP_217373927.1	competence protein CoiA	Machinery gene
JOA01_RS06005 (JOA01_06010)	metG	1183745..1185748 (-)	2004	WP_217373928.1	methionine--tRNA ligase	-
JOA01_RS06010 (JOA01_06015)	-	1185914..1186507 (+)	594	WP_217373929.1	DUF1361 domain-containing protein	-
JOA01_RS06015 (JOA01_06020)	-	1186551..1186895 (-)	345	WP_217373930.1	hypothetical protein	-
JOA01_RS06020 (JOA01_06025)	-	1187560..1187661 (-)	102	WP_217373931.1	putative holin-like toxin	-

Sequence

Protein

• Length: 312 a.a.
• Molecular weight: 36626.45 Da
• Isoelectric Point: 8.3769

>NTDB_id=532177 JOA01_RS06000 WP_217373927.1 1182742..1183680(-) (coiA) [Streptococcus parasuis strain BS26]
MLIALDEDGQVFNVLENPAPQGRYFCPGCGGLVRYKSGKVLRSHFAHVTLRDCHYFSENESTQHLSLKSCLYRWLVNTER
VELEKCLQELGQIADLFVNDCLVMEVQCSSLPISRLQLRTQAYREAGYLVLWLLGKDLWLKERLTNLHKQFLSFSMNMGF
HLWELDDEKKELRLRYLIHEDLRGKVHCLTKVFPFGEGNLLEILRQPFAKQILSSMTCPMDEDFPRYIAQQLYYKSPKWL
ALQAEAYGRGENLLTKRVFDWFPHIRLPRSAIGFAQIQVNLNSVYQDFDGYYARVKDKRNQVLYPPVIYLKK

Nucleotide

• Length: 939 bp

>NTDB_id=532177 JOA01_RS06000 WP_217373927.1 1182742..1183680(-) (coiA) [Streptococcus parasuis strain BS26]
ATGTTAATTGCACTTGATGAAGATGGGCAAGTTTTTAATGTCTTGGAAAATCCTGCGCCACAAGGTCGATATTTTTGTCC
AGGTTGTGGAGGCCTAGTCCGATACAAATCCGGAAAAGTTCTGCGTTCGCACTTTGCCCACGTCACCCTGCGGGACTGCC
ACTATTTTTCCGAGAATGAGTCCACCCAACATCTGTCCCTCAAGTCTTGTCTGTACAGGTGGTTAGTCAATACCGAACGA
GTTGAACTTGAAAAATGCCTGCAGGAGTTAGGTCAGATAGCGGACTTATTTGTCAATGATTGTTTAGTCATGGAAGTCCA
ATGTTCCAGTCTGCCGATTTCTCGTTTGCAGCTGAGGACGCAAGCCTATCGTGAGGCTGGTTATCTGGTTCTTTGGTTGC
TTGGCAAGGATTTGTGGCTCAAGGAACGACTGACCAATTTGCACAAGCAATTTCTCTCTTTTAGTATGAATATGGGTTTT
CACCTCTGGGAATTGGATGACGAGAAAAAAGAATTGCGGCTCCGTTACCTTATTCATGAAGACTTACGAGGTAAGGTCCA
CTGTCTGACAAAGGTTTTTCCATTTGGCGAGGGAAATTTATTGGAAATCTTGCGTCAGCCCTTTGCCAAGCAAATCCTAT
CTAGCATGACTTGTCCTATGGATGAGGATTTTCCTCGTTACATTGCTCAACAGCTTTATTACAAATCCCCCAAATGGCTC
GCTCTGCAAGCGGAGGCTTATGGACGTGGAGAAAATCTACTGACAAAGAGAGTATTTGACTGGTTTCCCCACATCCGACT
GCCCCGCTCTGCCATTGGCTTTGCCCAGATACAGGTAAATTTGAACTCGGTTTACCAGGACTTTGATGGCTATTATGCTA
GGGTTAAAGACAAGAGAAATCAAGTCCTTTATCCACCGGTTATTTACCTTAAAAAATAA

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (19-231)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus mitis NCTC 12261	53.226	99.359	0.529
coiA	Streptococcus pneumoniae TIGR4	51.29	99.359	0.51
coiA	Streptococcus pneumoniae Rx1	51.29	99.359	0.51
coiA	Streptococcus pneumoniae D39	51.29	99.359	0.51
coiA	Streptococcus pneumoniae R6	51.29	99.359	0.51
coiA	Lactococcus lactis subsp. cremoris KW2	42.188	100	0.433