Detailed information NTG0528326

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: E1N14_RS19940
• Genome accession: NZ_CP068230
• Coordinates: 4483562..4485082 (+)
• Length: 506 a.a.
• NCBI ID: WP_025010080.1
• Uniprot ID: -
• Organism: Shewanella algae strain CECT-5071
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 4478562..4490082

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E1N14_RS19915 (E1N14_019920)	-	4479423..4480421 (-)	999	WP_162173425.1	ABC transporter substrate-binding protein	-
E1N14_RS19920 (E1N14_019925)	-	4480581..4480829 (-)	249	WP_025010076.1	hypothetical protein	-
E1N14_RS19925 (E1N14_019930)	-	4480985..4481800 (-)	816	WP_025010077.1	EAL domain-containing protein	-
E1N14_RS19930 (E1N14_019935)	-	4482119..4482916 (+)	798	WP_025010078.1	winged helix-turn-helix domain-containing protein	-
E1N14_RS19935 (E1N14_019940)	-	4482904..4483404 (+)	501	WP_025010079.1	hypothetical protein	-
E1N14_RS19940 (E1N14_019945)	comM	4483562..4485082 (+)	1521	WP_025010080.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
E1N14_RS19945 (E1N14_019950)	-	4485182..4486078 (+)	897	WP_025010081.1	LysR substrate-binding domain-containing protein	-
E1N14_RS19950 (E1N14_019955)	phnX	4486181..4486990 (-)	810	WP_025010082.1	phosphonoacetaldehyde hydrolase	-
E1N14_RS19955 (E1N14_019960)	-	4486978..4488105 (-)	1128	WP_037436805.1	phosphonoacetaldehyde reductase	-
E1N14_RS19960 (E1N14_019965)	phnE	4488124..4488927 (-)	804	WP_045283250.1	phosphonate ABC transporter, permease protein PhnE	-
E1N14_RS19965 (E1N14_019970)	phnC	4488921..4489748 (-)	828	WP_025010083.1	phosphonate ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 506 a.a.
• Molecular weight: 54376.77 Da
• Isoelectric Point: 8.4905

>NTDB_id=528326 E1N14_RS19940 WP_025010080.1 4483562..4485082(+) (comM) [Shewanella algae strain CECT-5071]
MPIARVATRAAKGVEAPQVLVEAHLSNGLPAFNLVGLPEASVKEARERVRSAIINAGFEFPMRRITINLAPADLPKQGGR
YDLPIAIGILAASGQLPLKSLDDHEFVGELGLSGEVRHCTGILPVIIAARQRGIKLVLPQDNRSEADLVGYQQCCLAQHL
QHIAAYLHGQQTLPGIVPGTEWLEQSKPNSSDCLSEVIGQYQAKQALEIAAAGGHNLLMLGPPGTGKTMLASRIISLLPP
MSYEEALEVAAIHSVAGMATEPGEFYRRPFRAPHHTSSAISLVGGGSIPKPGEISLAHLGVLFLDEIAEFPRKVLDCLRE
PMETGHVIISRAAAKLRFDARFQLIAAMNPSPCGDAGPGSRASPEQIRRYLARLSGPFIDRFDLTIEVPKLPPGALTSDA
AQGETSEQIAARVAAARELQLSRAGVLNSQLGSKALKQAGFKPGDLAFLEQSVNQLGLSVRSFHRLQRVARTIADLQLSP
MVERRHLAQALGYRAMDRLLASLQQL

Nucleotide

• Length: 1521 bp

>NTDB_id=528326 E1N14_RS19940 WP_025010080.1 4483562..4485082(+) (comM) [Shewanella algae strain CECT-5071]
ATGCCCATAGCCAGAGTTGCCACCCGAGCCGCCAAAGGTGTGGAGGCGCCTCAGGTACTGGTCGAAGCTCACCTCTCCAA
CGGCCTGCCGGCCTTCAATCTGGTGGGGTTGCCGGAAGCTTCGGTCAAGGAAGCCAGAGAAAGAGTCCGCAGCGCCATAA
TCAATGCGGGTTTTGAATTCCCCATGCGCAGGATAACCATCAATCTGGCACCGGCCGATCTGCCCAAGCAAGGTGGACGT
TACGACCTTCCTATTGCCATTGGTATTCTGGCAGCATCCGGGCAACTGCCACTGAAATCTCTGGACGATCATGAATTTGT
CGGTGAGCTTGGGCTGTCCGGTGAGGTCAGGCACTGCACTGGTATCCTGCCGGTGATCATCGCCGCCCGTCAAAGAGGCA
TCAAACTGGTGTTGCCACAGGATAACCGCAGTGAGGCGGATTTGGTGGGCTATCAACAGTGTTGCCTGGCCCAGCACCTG
CAACATATCGCCGCCTATCTGCATGGACAGCAAACCCTGCCGGGGATAGTACCGGGAACCGAATGGCTGGAACAGTCCAA
GCCGAACTCGAGTGACTGCCTGTCGGAGGTCATAGGCCAATATCAAGCCAAACAAGCGCTGGAAATCGCTGCCGCCGGCG
GGCATAACCTGCTGATGCTGGGGCCACCTGGCACAGGCAAAACCATGCTGGCCAGCCGGATAATCTCACTCCTGCCCCCC
ATGAGTTATGAAGAGGCGCTGGAAGTGGCTGCGATTCATTCAGTGGCCGGTATGGCTACTGAGCCGGGGGAGTTTTATCG
CCGCCCGTTTCGTGCTCCGCACCACACCAGCTCCGCCATCTCATTGGTGGGTGGCGGCTCGATTCCCAAACCCGGCGAGA
TTTCACTGGCTCACCTGGGAGTGCTGTTTCTCGATGAAATTGCCGAGTTTCCCCGCAAGGTACTCGACTGCTTGCGTGAA
CCCATGGAAACCGGCCATGTCATCATCTCCCGCGCCGCAGCCAAACTGCGCTTCGATGCCCGTTTTCAACTCATCGCCGC
CATGAATCCCAGCCCATGTGGAGATGCCGGCCCGGGAAGCCGCGCCAGCCCAGAGCAGATCCGCCGTTACCTGGCCCGGC
TGTCAGGCCCTTTCATTGACAGATTCGACCTCACCATTGAGGTGCCAAAACTCCCGCCAGGCGCCTTGACTTCAGATGCG
GCGCAAGGTGAAACCAGTGAGCAGATAGCCGCCAGAGTAGCGGCAGCGCGGGAACTACAACTCAGCCGCGCCGGCGTACT
CAATAGCCAGTTGGGCAGTAAGGCATTGAAGCAGGCAGGTTTCAAACCCGGCGATCTGGCGTTTCTCGAACAGAGTGTCA
ATCAGCTGGGATTATCGGTGCGCAGCTTTCATCGGCTGCAACGAGTGGCGCGCACCATAGCCGATCTGCAGCTCAGCCCC
ATGGTCGAGCGACGCCATCTGGCCCAGGCCCTGGGTTATCGGGCGATGGACCGTTTGCTGGCCAGCCTGCAACAGCTCTG
A

Domains

Predicted by InterproScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (194-392)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (403-494)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	55.819	100	0.559
comM	Haemophilus influenzae Rd KW20	55.273	100	0.559
comM	Vibrio campbellii strain DS40M4	55.03	100	0.551
comM	Glaesserella parasuis strain SC1401	54.832	100	0.549
comM	Legionella pneumophila str. Paris	48.096	98.617	0.474
comM	Legionella pneumophila strain ERS1305867	48.096	98.617	0.474
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	43.478	100	0.435