Detailed information    

insolico Bioinformatically predicted

Overview


Name   comE/blpR   Type   Regulator
Locus tag   JJN14_RS02070 Genome accession   NZ_CP067992
Coordinates   412701..413438 (+) Length   245 a.a.
NCBI ID   WP_201058769.1    Uniprot ID   -
Organism   Streptococcus mitis strain S022-V7-A3     
Function   activate transcription of early competence genes; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 407701..418438
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JJN14_RS02040 (JJN14_02040) - 409138..409425 (-) 288 WP_000777754.1 hypothetical protein -
  JJN14_RS02045 (JJN14_02045) - 409435..409845 (-) 411 WP_201058766.1 HIT family protein -
  JJN14_RS02050 (JJN14_02050) pptA 409913..410644 (+) 732 WP_000889954.1 ABC transporter ATP-binding protein Regulator
  JJN14_RS02055 (JJN14_02055) - 410641..411690 (+) 1050 WP_201058767.1 ABC transporter permease -
  JJN14_RS02060 (JJN14_02060) - 411752..412081 (-) 330 WP_201058768.1 helicase BlpT -
  JJN14_RS02065 (JJN14_02065) - 412358..412696 (+) 339 WP_150922867.1 LytTR family DNA-binding domain-containing protein -
  JJN14_RS02070 (JJN14_02070) comE/blpR 412701..413438 (+) 738 WP_201058769.1 response regulator transcription factor Regulator
  JJN14_RS02075 (JJN14_02075) - 413452..414801 (+) 1350 WP_201058770.1 sensor histidine kinase -
  JJN14_RS02080 (JJN14_02080) - 414870..415226 (+) 357 WP_033679716.1 hypothetical protein -
  JJN14_RS02085 (JJN14_02085) - 415928..416092 (+) 165 WP_201058771.1 hypothetical protein -
  JJN14_RS02090 (JJN14_02090) - 416089..416493 (+) 405 WP_201058772.1 immunity protein -
  JJN14_RS02095 (JJN14_02095) blpZ 416539..416787 (+) 249 WP_000276515.1 immunity protein BlpZ -
  JJN14_RS02100 (JJN14_02100) - 416818..417429 (+) 612 WP_201058773.1 CPBP family intramembrane glutamic endopeptidase -
  JJN14_RS02105 (JJN14_02105) ccrZ 417591..418385 (+) 795 WP_000362999.1 cell cycle regulator CcrZ -

Sequence


Protein


Download         Length: 245 a.a.        Molecular weight: 28818.98 Da        Isoelectric Point: 6.3078

>NTDB_id=526143 JJN14_RS02070 WP_201058769.1 412701..413438(+) (comE/blpR) [Streptococcus mitis strain S022-V7-A3]
MRIFVLEDDFSQQARIETTIEKLLKEHHITPSSFEVFGKPDQLLAEVHEKGAHQLFFLDIEIRNEEMKGLEVARKIRERD
PYALIVFVTTHSEFMPLSFRYQVSALDYIDKALSAEEFESRIETALLYANSQDSKSLAEDCFYFKSKFAQFQYPFKEVYY
IETSPRPHRVILYTKTDRLEFTASLEEVLKQEPRFLQCHRSFLVNPTNVVRLDKKEKLLFFPNGGSCLIARYKVREVSEA
ITNLH

Nucleotide


Download         Length: 738 bp        

>NTDB_id=526143 JJN14_RS02070 WP_201058769.1 412701..413438(+) (comE/blpR) [Streptococcus mitis strain S022-V7-A3]
ATGAGAATATTTGTTTTAGAAGATGATTTTTCCCAACAAGCTAGAATTGAAACGACCATTGAGAAACTTTTGAAAGAACA
TCATATCACTCCCAGCTCTTTTGAGGTCTTTGGCAAGCCAGATCAACTGCTGGCAGAGGTGCATGAGAAGGGGGCGCATC
AGCTTTTCTTTTTGGATATTGAGATTCGAAACGAAGAGATGAAGGGGCTAGAGGTGGCTAGAAAGATTCGGGAACGGGAC
CCCTATGCTCTGATTGTCTTTGTGACGACTCACTCGGAGTTTATGCCCTTGTCCTTTCGCTACCAAGTGTCTGCTTTGGA
CTACATTGATAAGGCCCTTTCGGCAGAGGAGTTTGAATCTCGGATCGAGACAGCCCTTCTCTATGCCAATAGTCAAGACA
GTAAAAGTCTGGCGGAAGATTGCTTTTACTTTAAATCAAAATTTGCTCAATTCCAGTATCCCTTTAAAGAGGTTTACTAT
ATCGAAACGTCCCCAAGACCCCATCGTGTTATTCTCTATACCAAGACGGACAGGCTGGAATTTACGGCGAGTTTAGAGGA
GGTTCTCAAGCAGGAGCCTCGTTTCTTGCAGTGTCATCGCTCTTTTCTAGTCAATCCAACTAATGTAGTTCGTTTGGATA
AGAAAGAAAAACTCCTTTTCTTTCCTAATGGTGGAAGCTGTCTCATCGCGCGTTATAAGGTCAGGGAAGTGTCTGAGGCT
ATCACTAACTTACACTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comE/blpR Streptococcus mutans UA159

53.878

100

0.539

  comE/comE1 Streptococcus equinus JB1

43.038

96.735

0.416

  comE/comE2 Streptococcus equinus JB1

38.43

98.776

0.38

  comE Streptococcus infantis strain Atu-4

37.398

100

0.376