Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   FJQ98_RS11105 Genome accession   NZ_CP067341
Coordinates   2333299..2335128 (+) Length   609 a.a.
NCBI ID   WP_053596871.1    Uniprot ID   A0A0M8PNP7
Organism   Lysinibacillus agricola strain FJAT-51161     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2328299..2340128
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FJQ98_RS11090 (FJQ98_11090) - 2330168..2330467 (+) 300 WP_075807347.1 SemiSWEET transporter -
  FJQ98_RS11095 (FJQ98_11095) - 2331023..2331472 (+) 450 WP_143115058.1 MarR family transcriptional regulator -
  FJQ98_RS11100 (FJQ98_11100) rcrP 2331543..2333306 (+) 1764 WP_053596870.1 ABC transporter ATP-binding protein Regulator
  FJQ98_RS11105 (FJQ98_11105) rcrQ 2333299..2335128 (+) 1830 WP_053596871.1 ABC transporter ATP-binding protein Regulator
  FJQ98_RS11110 (FJQ98_11110) - 2335524..2336420 (-) 897 WP_053596872.1 LysR family transcriptional regulator -
  FJQ98_RS11115 (FJQ98_11115) - 2336829..2337020 (+) 192 WP_053596873.1 hypothetical protein -
  FJQ98_RS11120 (FJQ98_11120) thrC 2337231..2338490 (+) 1260 WP_053596874.1 threonine synthase -
  FJQ98_RS11125 (FJQ98_11125) - 2338704..2339306 (-) 603 WP_241774638.1 transposase -

Sequence

Protein


Download         Length: 609 a.a.        Molecular weight: 67273.46 Da        Isoelectric Point: 7.7387

>NTDB_id=525488 FJQ98_RS11105 WP_053596871.1 2333299..2335128(+) (rcrQ) [Lysinibacillus agricola strain FJAT-51161]
MSNKQANKPRKGTGAPGNMAAPGEKPKNFKKPWGKLIAYCKPYLPAIIFALVLATVGTIFTIIGPNMLSEITDLIMEGIT
GEIDITAIGKIGLLLAILYGLSFIFNYIQAFIMATITQRVSKRLRSDISNKIDKLPLKYFDSTTYGDVLSRVTNDVDMIG
QSLNQSIGSLVTAGVMFFGSLIMMFSINVTMTLSAIAATVVGFVLMIFIISKSRKYFIRQQQDLGRINGHIEEIYSGHEV
MKVYNGEKAAKQEFNEINESLFNSAWRAQFMSGMMMPLMIFIGNLGYVVVCVVGAALTMKGSITFGVIVSFMVYIRLFTQ
PLSQFAQAATSLQSTAAASERVFEFLQEEELKDESDKKATLDAKDVKGNVQFKNVKFGYTKEKLIINDFSAQIKAGQKVA
IVGPTGAGKTTLVNLLMRFYEVDSGEIMIEDVATKSITRKNVHDLFCMVLQDTWLFEGTVKENIVYNKEAVTEEEVVAAC
KAVGLDHFIRTLPKGYETVLNDKTSLSVGQKQLITIARAMVKKAPLLILDEATSSVDTRTEALIQEAMDKLMVGKTSFVI
AHRLSTIKNADLILVMKDGDIIESGNHEELIAEKGFYADLYNSQFENVS

Nucleotide


Download         Length: 1830 bp        

>NTDB_id=525488 FJQ98_RS11105 WP_053596871.1 2333299..2335128(+) (rcrQ) [Lysinibacillus agricola strain FJAT-51161]
ATGAGTAATAAACAAGCAAATAAGCCCCGAAAAGGTACTGGTGCTCCAGGTAATATGGCAGCTCCTGGAGAAAAGCCAAA
GAATTTTAAAAAGCCTTGGGGAAAGCTGATTGCCTATTGTAAACCTTATTTACCAGCGATTATCTTTGCACTTGTCTTGG
CAACTGTAGGAACAATTTTCACGATCATTGGACCCAATATGCTCAGTGAGATAACCGATTTGATAATGGAAGGTATTACT
GGTGAGATTGATATTACGGCTATAGGAAAAATTGGTCTGCTTCTTGCTATTTTGTATGGATTGAGTTTTATTTTCAATTA
TATTCAGGCGTTTATTATGGCAACTATTACGCAGCGAGTTTCCAAAAGGCTACGTTCAGATATTTCGAACAAAATCGATA
AATTACCGTTGAAATACTTTGACTCTACAACCTACGGAGATGTGTTAAGTCGTGTCACGAATGATGTGGATATGATTGGG
CAGTCTCTAAACCAAAGTATTGGTTCATTAGTGACAGCGGGAGTCATGTTCTTTGGATCTTTGATTATGATGTTCTCTAT
TAATGTTACGATGACACTTTCTGCCATTGCTGCAACTGTCGTTGGATTTGTATTAATGATCTTTATCATATCCAAATCCC
GCAAATACTTCATACGCCAGCAGCAAGACCTTGGTAGAATAAACGGTCATATTGAAGAAATCTATTCAGGGCATGAAGTC
ATGAAGGTTTATAACGGTGAAAAAGCAGCTAAGCAAGAATTTAATGAAATCAATGAAAGTCTTTTTAATAGCGCTTGGCG
CGCGCAGTTTATGTCGGGCATGATGATGCCTCTCATGATCTTTATTGGAAATTTAGGCTATGTTGTTGTTTGTGTAGTAG
GTGCTGCACTTACAATGAAAGGTTCCATTACATTTGGTGTTATTGTTTCATTTATGGTGTATATCCGCTTATTTACGCAA
CCATTGTCTCAGTTTGCACAGGCAGCTACAAGCTTGCAGTCAACTGCCGCAGCAAGTGAACGTGTATTTGAGTTCTTACA
AGAAGAGGAGCTTAAAGATGAAAGCGATAAGAAAGCCACTTTAGATGCCAAAGATGTTAAAGGTAATGTGCAATTTAAAA
ACGTTAAGTTTGGATATACAAAAGAGAAACTTATTATTAATGATTTCTCTGCTCAGATAAAAGCTGGTCAAAAAGTTGCC
ATTGTCGGACCTACTGGGGCTGGGAAAACAACGCTTGTTAATCTTCTCATGCGTTTCTATGAAGTAGATAGTGGAGAAAT
CATGATTGAGGACGTAGCGACTAAGTCGATTACTCGTAAAAATGTTCACGACTTATTTTGCATGGTGCTGCAAGATACTT
GGCTATTCGAAGGTACCGTTAAGGAAAATATCGTTTATAACAAAGAAGCTGTAACCGAAGAAGAAGTGGTAGCAGCTTGT
AAGGCAGTAGGTTTGGACCACTTTATTAGAACCTTGCCGAAAGGTTATGAGACAGTTTTAAACGATAAAACAAGTTTATC
TGTAGGACAAAAACAGCTTATTACCATTGCAAGGGCGATGGTTAAAAAAGCACCGTTGCTTATTTTAGATGAAGCTACTA
GTTCCGTTGACACGCGTACTGAAGCACTTATTCAAGAAGCAATGGATAAATTGATGGTAGGAAAAACATCATTTGTCATT
GCACACAGACTTTCAACAATTAAAAACGCCGATTTGATTTTAGTGATGAAAGACGGAGATATTATTGAAAGTGGTAATCA
TGAAGAGCTGATTGCAGAAAAAGGATTCTATGCGGATCTATATAATAGTCAGTTTGAAAATGTTTCTTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(387-534)

ABC transporter transmembrane region (ABC_membrane)

(47-322)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0M8PNP7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

58.16

94.581

0.55