Detailed information NTG0525087

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: JGR64_RS00960
• Genome accession: NZ_CP067112
• Coordinates: 212792..214306 (-)
• Length: 504 a.a.
• NCBI ID: WP_199374649.1
• Uniprot ID: -
• Organism: Luteimonas sp. MC1572
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 207792..219306

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JGR64_RS00940 (JGR64_00940)	-	208015..208608 (+)	594	WP_305067918.1	lysophospholipid acyltransferase family protein	-
JGR64_RS00945 (JGR64_00945)	-	208633..209598 (-)	966	WP_234446973.1	LysR family transcriptional regulator	-
JGR64_RS00950 (JGR64_00950)	aceB	209709..211340 (+)	1632	WP_199374645.1	malate synthase A	-
JGR64_RS00955 (JGR64_00955)	aceA	211406..212701 (+)	1296	WP_199374647.1	isocitrate lyase	-
JGR64_RS00960 (JGR64_00960)	comM	212792..214306 (-)	1515	WP_199374649.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
JGR64_RS00965 (JGR64_00965)	-	214317..214607 (-)	291	WP_199374651.1	accessory factor UbiK family protein	-
JGR64_RS00970 (JGR64_00970)	-	214740..215078 (+)	339	WP_182823362.1	P-II family nitrogen regulator	-
JGR64_RS00975 (JGR64_00975)	speE	215127..215975 (-)	849	WP_199374653.1	polyamine aminopropyltransferase	-
JGR64_RS00980 (JGR64_00980)	speA	216133..218016 (+)	1884	WP_199374655.1	arginine decarboxylase	-
JGR64_RS00985 (JGR64_00985)	-	218047..218502 (-)	456	WP_199374657.1	DMT family transporter	-
JGR64_RS00990 (JGR64_00990)	-	218499..219257 (-)	759	WP_199374659.1	SDR family NAD(P)-dependent oxidoreductase	-

Sequence

Protein

• Length: 504 a.a.
• Molecular weight: 52903.84 Da
• Isoelectric Point: 8.1154

>NTDB_id=525087 JGR64_RS00960 WP_199374649.1 212792..214306(-) (comM) [Luteimonas sp. MC1572]
MAGLAIVHGRARAGVRAPEVTIEVYMSGGLPRMSMVGLPQATVRESKDRVRAAIRCAQYEFPPRVTTVNLAPADLPKGGG
RFDLPIALGILAASDQLPRTALAGHEFLGELGLSGELRAIDGVLPAALACGEAGRVLVVPADNGAEAALARNVDVRVART
LSEVCAHLTGERPLPRACAAPVVAAMPPDLADVRGQLHARRALEVAAAGGHHLLLVGSPGCGKTLLASRLPGLLPEASEA
EALEAAAIASVSGRGIDPARWRQRPFRAPHHTASAVALVGGGSEPRPGEISLAHHGVLFLDELPEWSRQALEVLREPLES
GTVTVSRAARQSDFPARFQLVAAMNPCPCGWAGDVSGRCLCTADVVQRYRMRISGPLLDRIDLHVDVPRVAPAELRPDAV
AGESSTAVRDRVCAARALQLARAGCLNAHLDQAGTAAHCRLAPRDQALLERAIDALQLSARAMHRILRVARTIADLAASD
AIASDHLAEALGYRRVDRGVAQAA

Nucleotide

• Length: 1515 bp

>NTDB_id=525087 JGR64_RS00960 WP_199374649.1 212792..214306(-) (comM) [Luteimonas sp. MC1572]
ATGGCCGGGCTCGCCATCGTGCACGGGCGTGCACGCGCCGGCGTGCGCGCGCCGGAAGTGACCATCGAGGTGTACATGAG
CGGCGGCCTGCCGCGCATGAGCATGGTCGGCCTGCCGCAGGCCACGGTGCGCGAGTCCAAGGACCGCGTGCGCGCCGCCA
TCCGCTGCGCACAGTACGAGTTCCCGCCGCGGGTCACCACGGTCAACCTCGCCCCCGCGGACCTGCCCAAGGGCGGCGGC
CGCTTCGACCTGCCGATCGCGCTCGGCATCCTCGCCGCCAGCGACCAGCTGCCGCGTACCGCGCTGGCCGGCCACGAATT
CCTCGGCGAGCTCGGCCTCAGCGGCGAGCTGCGCGCGATCGACGGCGTGCTGCCCGCGGCACTCGCCTGCGGCGAGGCCG
GGCGCGTGCTGGTGGTGCCGGCCGACAACGGCGCCGAGGCCGCACTGGCGCGCAACGTGGACGTGCGCGTGGCGCGCACC
CTGTCGGAGGTCTGCGCGCACCTCACCGGCGAGCGGCCGCTGCCGCGCGCCTGCGCCGCACCGGTGGTCGCGGCCATGCC
GCCCGACCTTGCCGACGTGCGCGGCCAGCTGCACGCGCGGCGCGCACTCGAGGTCGCCGCCGCGGGTGGCCATCACCTCC
TGCTGGTGGGAAGCCCCGGCTGCGGCAAGACCCTGCTGGCCTCGCGCCTGCCCGGGCTGCTGCCCGAAGCGAGCGAGGCC
GAGGCGCTCGAGGCGGCGGCGATCGCCTCGGTCAGCGGGCGCGGCATCGATCCCGCGCGCTGGCGGCAGCGCCCGTTCCG
CGCGCCGCACCACACCGCCAGCGCGGTCGCGCTGGTCGGTGGCGGTAGCGAGCCACGGCCCGGCGAGATCTCGCTGGCCC
ACCACGGCGTGCTGTTCCTGGACGAGTTGCCCGAATGGAGCCGCCAGGCGCTCGAGGTGCTGCGCGAGCCGCTGGAGTCG
GGGACGGTCACGGTGTCGCGCGCGGCGCGGCAGAGCGATTTCCCGGCGCGCTTCCAGCTGGTGGCGGCCATGAACCCCTG
CCCCTGCGGCTGGGCCGGCGACGTCTCCGGCCGCTGCCTGTGTACGGCGGATGTCGTGCAGCGCTACCGCATGCGAATTT
CCGGCCCCCTGCTCGACCGCATCGACCTGCACGTCGACGTGCCGCGGGTCGCGCCGGCCGAGCTGCGCCCCGATGCCGTG
GCGGGCGAATCCAGCACGGCGGTCCGCGACCGGGTGTGTGCCGCGCGTGCCCTGCAGCTCGCGCGCGCCGGCTGCCTCAA
CGCCCACCTCGACCAGGCCGGCACCGCCGCGCACTGCCGTCTGGCGCCGCGCGACCAGGCGTTGCTGGAGCGGGCGATCG
ACGCGCTGCAGCTCTCGGCCCGCGCCATGCACCGCATCCTGCGCGTGGCGCGCACCATCGCCGACCTCGCCGCGAGCGAT
GCGATCGCCAGCGACCACCTGGCCGAAGCGCTCGGCTACCGGCGCGTGGATCGCGGCGTGGCGCAGGCCGCGTGA

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (402-494)

• Subunit ChlI of Mg-chelatase (ChlI) (22-143)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (189-394)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	54.183	99.603	0.54
comM	Vibrio campbellii strain DS40M4	52.789	99.603	0.526
comM	Haemophilus influenzae Rd KW20	50.898	99.405	0.506
comM	Glaesserella parasuis strain SC1401	50.699	99.405	0.504
comM	Legionella pneumophila str. Paris	50.099	100	0.502
comM	Legionella pneumophila strain ERS1305867	50.099	100	0.502
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	45.168	100	0.454