Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   SMUGS5_RS09805 Genome accession   NC_018089
Coordinates   2024256..2025431 (+) Length   391 a.a.
NCBI ID   WP_014835077.1    Uniprot ID   -
Organism   Streptococcus mutans GS-5     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2019256..2030431
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMUGS5_RS09795 (SMUGS5_09725) - 2022534..2023196 (-) 663 WP_002262652.1 YoaK family protein -
  SMUGS5_RS09800 (SMUGS5_09730) rlmH 2023539..2024018 (-) 480 WP_002262651.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  SMUGS5_RS09805 (SMUGS5_09735) htrA 2024256..2025431 (+) 1176 WP_014835077.1 S1C family serine protease Regulator
  SMUGS5_RS09810 (SMUGS5_09740) - 2025898..2026667 (+) 770 Protein_1909 ParB/RepB/Spo0J family partition protein -
  SMUGS5_RS10300 (SMUGS5_09745) - 2026869..2027027 (+) 159 Protein_1910 chromosomal replication initiator protein DnaA -

Sequence


Protein


Download         Length: 391 a.a.        Molecular weight: 41795.94 Da        Isoelectric Point: 7.3047

>NTDB_id=52072 SMUGS5_RS09805 WP_014835077.1 2024256..2025431(+) (htrA) [Streptococcus mutans GS-5]
MVYTFFSYFLTFILGVISTLTFNWITGNKSFSNNGKTTVSNVIYDTKSNTTKAVKNVKNTVVSVINYQKTDNSYYNYDSG
SQEKNKSEDGLGVYGEGSGVIYKKDGDSAYLVTNNHVVKDAEKLEIMMANGKKVVGKLVGSDTYSDLAVIKISSKYVTTV
AEFANSDKIKVGEPAIAIGSPLGSDYANSVTEGIVSSLSRTVTSQNENGETISTNAIQTDAAINPGNSGGALINIKGQVI
GINSSKIASSNNSNSGVAVEGMGFAIPSNDVVSIINQLEENGEVVRPALGISMANLSEASTSGRDTLKIPSDVTSGIVVL
STQSGMPADGKLKKYDVITEIDGKKVASISDLQSILYKHKKGDKIKLTFYREKDKQTVEIQLTKTSQDLNH

Nucleotide


Download         Length: 1176 bp        

>NTDB_id=52072 SMUGS5_RS09805 WP_014835077.1 2024256..2025431(+) (htrA) [Streptococcus mutans GS-5]
ATGGTTTATACCTTTTTTAGTTATTTTTTAACTTTTATTTTAGGGGTCATATCAACACTTACCTTTAATTGGATAACTGG
TAACAAATCGTTTTCTAACAATGGAAAAACAACTGTTAGTAATGTCATTTATGATACCAAATCTAACACTACCAAGGCTG
TTAAAAATGTCAAAAATACAGTTGTATCTGTCATCAATTATCAAAAAACAGATAATAGTTATTACAATTATGACAGCGGT
TCTCAAGAAAAAAATAAATCAGAGGATGGTCTAGGAGTCTACGGTGAAGGTTCTGGTGTTATCTATAAAAAAGATGGCGA
TAGTGCTTATTTAGTTACAAACAATCATGTCGTTAAAGATGCAGAAAAGTTAGAAATCATGATGGCTAATGGTAAAAAAG
TTGTCGGTAAATTAGTAGGTTCTGATACTTATTCTGATCTGGCTGTTATTAAAATTTCTTCTAAGTATGTTACGACAGTT
GCTGAATTTGCTAATTCGGATAAAATAAAAGTTGGAGAACCAGCAATCGCTATTGGTAGCCCTTTAGGCAGTGATTATGC
TAATTCTGTAACAGAAGGAATTGTTTCAAGTCTCAGTCGTACAGTAACTTCACAAAATGAAAATGGCGAAACAATTTCAA
CTAATGCTATTCAAACAGACGCAGCTATTAACCCTGGTAATTCTGGTGGCGCTTTAATTAATATCAAAGGACAAGTTATT
GGTATCAATTCAAGTAAAATTGCATCAAGTAATAACTCAAATAGTGGCGTTGCTGTTGAAGGAATGGGCTTTGCAATTCC
TTCAAACGATGTTGTCTCTATTATTAATCAATTAGAAGAAAATGGTGAAGTTGTTAGACCCGCTCTTGGTATTTCAATGG
CTAATCTTAGTGAAGCTTCAACAAGTGGAAGAGATACTTTAAAAATACCAAGTGATGTCACAAGCGGTATTGTTGTTCTT
TCAACACAAAGTGGTATGCCAGCAGATGGGAAGCTGAAGAAATATGATGTCATTACAGAAATTGATGGGAAGAAGGTAGC
GTCTATCAGCGATCTTCAAAGTATTCTTTACAAACACAAAAAGGGAGATAAAATTAAACTCACTTTCTATCGCGAAAAAG
ATAAACAAACAGTTGAGATCCAATTAACTAAAACAAGTCAAGATTTGAATCATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

99.225

98.977

0.982

  htrA Streptococcus gordonii str. Challis substr. CH1

56.555

99.488

0.563

  htrA Streptococcus mitis NCTC 12261

55.352

97.954

0.542

  htrA Streptococcus pneumoniae Rx1

57.79

90.281

0.522

  htrA Streptococcus pneumoniae D39

57.79

90.281

0.522

  htrA Streptococcus pneumoniae R6

57.79

90.281

0.522

  htrA Streptococcus pneumoniae TIGR4

57.79

90.281

0.522


Multiple sequence alignment