Detailed information NTG0051886

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: SCIM_RS07335
• Genome accession: NC_018073
• Coordinates: 1504526..1505593 (-)
• Length: 355 a.a.
• NCBI ID: WP_003074405.1
• Uniprot ID: -
• Organism: Streptococcus intermedius JTH08
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1499526..1510593

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SCIM_RS07315 (SCIM_1318)	-	1500161..1501615 (+)	1455	WP_003076157.1	sucrose-6-phosphate hydrolase	-
SCIM_RS07320 (SCIM_1319)	-	1501596..1502561 (+)	966	WP_003075902.1	LacI family DNA-binding transcriptional regulator	-
SCIM_RS07325 (SCIM_1320)	-	1502647..1503465 (-)	819	WP_003076013.1	Cof-type HAD-IIB family hydrolase	-
SCIM_RS07330 (SCIM_1321)	amiF	1503592..1504515 (-)	924	WP_003074407.1	ATP-binding cassette domain-containing protein	Regulator
SCIM_RS07335 (SCIM_1322)	amiE	1504526..1505593 (-)	1068	WP_003074405.1	ABC transporter ATP-binding protein	Regulator
SCIM_RS07340 (SCIM_1323)	amiD	1505602..1506528 (-)	927	WP_003075765.1	oligopeptide ABC transporter permease OppC	Regulator
SCIM_RS07345 (SCIM_1324)	amiC	1506528..1508024 (-)	1497	WP_003074402.1	ABC transporter permease	Regulator
SCIM_RS07350 (SCIM_1325)	amiA3	1508398..1510377 (-)	1980	WP_003076037.1	peptide ABC transporter substrate-binding protein	Regulator

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 39568.21 Da
• Isoelectric Point: 4.7859

>NTDB_id=51886 SCIM_RS07335 WP_003074405.1 1504526..1505593(-) (amiE) [Streptococcus intermedius JTH08]
MTQEKNVILTARDIVVEFDVRDKVLTAIRGVSLDLIEGEVLALVGESGSGKSVLTKTFTGMLEDNGRVAQGSINYRGQDL
TTLKSNKDWEPIRGVKIATIFQDPMTSLDPINTIGSQITEVIVKHQKKTAKEAKEMAIDYMNKVGIPDAEKRFSEYPFQY
SGGMRQRIVIAIALACRPDILICDEPTTALDVTIQAQIIDLLKSLQQEYQFTTIFITHDLGVVASIADKVAVMYAGEIVE
YGTVEEVFYDPRHPYTWSLLSSLPQLADDKGELYSIPGTPPSLYSHLQGDAFALRSDYAMEIDFEEKPPQIYVSDTHWAK
TWLLHENAPKVNKPAVIDDLHEKISSKMGFAHLNA

Nucleotide

• Length: 1068 bp

>NTDB_id=51886 SCIM_RS07335 WP_003074405.1 1504526..1505593(-) (amiE) [Streptococcus intermedius JTH08]
ATGACACAAGAAAAAAATGTAATATTGACTGCTCGCGATATTGTCGTGGAATTTGATGTTCGTGACAAAGTTTTAACAGC
TATTCGGGGCGTTTCGCTTGACCTCATCGAAGGTGAAGTTCTTGCGCTTGTAGGAGAATCTGGTTCTGGTAAGTCCGTTT
TGACAAAAACCTTTACTGGAATGTTAGAGGATAATGGTCGAGTAGCGCAAGGATCGATTAACTATCGTGGACAAGATTTG
ACAACATTGAAATCTAATAAGGATTGGGAACCTATTCGTGGTGTTAAAATTGCGACAATTTTCCAAGATCCAATGACAAG
TTTAGATCCGATTAATACGATTGGTAGCCAGATTACAGAAGTTATTGTAAAACATCAAAAGAAAACGGCAAAAGAAGCGA
AGGAAATGGCTATTGACTATATGAATAAGGTCGGTATTCCTGATGCTGAAAAGCGTTTTAGTGAGTATCCTTTCCAATAT
TCAGGAGGAATGCGTCAACGGATTGTTATTGCCATTGCGCTTGCTTGTCGTCCGGATATTCTAATCTGTGATGAACCTAC
GACAGCACTGGATGTTACCATTCAAGCGCAAATTATTGATTTGTTGAAATCATTGCAACAAGAGTATCAGTTCACCACTA
TTTTTATCACCCACGACCTTGGAGTAGTAGCAAGTATTGCGGATAAGGTTGCTGTTATGTATGCTGGAGAAATCGTCGAG
TATGGTACAGTAGAAGAGGTCTTTTATGATCCACGTCATCCGTATACTTGGAGTTTGTTATCAAGCTTACCACAGTTGGC
AGACGATAAAGGGGAGCTGTACTCTATTCCTGGTACGCCACCGTCTCTTTATTCACATTTACAAGGAGATGCGTTTGCTC
TCCGCTCAGACTATGCAATGGAAATTGATTTTGAGGAAAAACCGCCTCAAATCTATGTATCAGATACGCATTGGGCAAAA
ACATGGTTGCTTCATGAAAATGCTCCAAAAGTGAATAAACCTGCTGTTATTGATGATTTACACGAAAAAATTAGCTCAAA
AATGGGATTTGCCCATTTAAATGCTTAG

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (239-301)

• ABC transporter (ABC_tran) (29-187)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	86.158	99.718	0.859
amiE	Streptococcus thermophilus LMG 18311	84.746	99.718	0.845
amiE	Streptococcus thermophilus LMD-9	84.746	99.718	0.845
oppD	Streptococcus mutans UA159	55.966	99.155	0.555