Detailed information NTG0518063

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: JDY60_RS06790
• Genome accession: NZ_CP066172
• Coordinates: 1439587..1440654 (-)
• Length: 355 a.a.
• NCBI ID: WP_000159799.1
• Uniprot ID: A0A7H9FDL5
• Organism: Streptococcus oralis strain SF100
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1434587..1445654

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JDY60_RS06770 (JDY60_06770)	-	1434862..1435365 (-)	504	WP_000181363.1	tRNA (cytidine(34)-2'-O)-methyltransferase	-
JDY60_RS06775 (JDY60_06775)	trkA	1435766..1437115 (+)	1350	WP_200370479.1	Trk system potassium transporter TrkA	-
JDY60_RS06780 (JDY60_06780)	-	1437119..1438558 (+)	1440	WP_200370481.1	TrkH family potassium uptake protein	-
JDY60_RS06785 (JDY60_06785)	amiF	1438647..1439576 (-)	930	WP_200370488.1	ATP-binding cassette domain-containing protein	Regulator
JDY60_RS06790 (JDY60_06790)	amiE	1439587..1440654 (-)	1068	WP_000159799.1	ABC transporter ATP-binding protein	Regulator
JDY60_RS06795 (JDY60_06795)	amiD	1440663..1441589 (-)	927	WP_000103935.1	oligopeptide ABC transporter permease OppC	Regulator
JDY60_RS06800 (JDY60_06800)	amiC	1441589..1443085 (-)	1497	WP_200370490.1	ABC transporter permease	Regulator
JDY60_RS06805 (JDY60_06805)	amiA	1443152..1445131 (-)	1980	WP_200370491.1	peptide ABC transporter substrate-binding protein	Regulator

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 39558.21 Da
• Isoelectric Point: 4.6568

>NTDB_id=518063 JDY60_RS06790 WP_000159799.1 1439587..1440654(-) (amiE) [Streptococcus oralis strain SF100]
MTKESNVILTARDIVVEFDVRDKVLTAIRGVSLDLIEGEVLALVGESGSGKSVLTKTFTGMLEDNGRIAQGSIDYRGQDL
TALTSNKEWEKIRGAKIATIFQDPMTSLDPINTIGSQITEVIIKHQGKTAKEAKEMAIDYMNKVGIPDAEKRFEEYPFQY
SGGMRQRIVIAIALACRPDILICDEPTTALDVTIQAQIIDLLKTLQNEYHFTIIFITHDLGVVASIADKVAVMYAGEIVE
YGTVEEVFYDPRHPYTWSLLSSLPQLADDKGELYSIPGTPPSLYTELKGDAFALRSDYAMQIDFEEKAPKFSVTDTHWAK
TWLLHENAPKVEKPGVIADLHDKIRDKMGFAHLED

Nucleotide

• Length: 1068 bp

>NTDB_id=518063 JDY60_RS06790 WP_000159799.1 1439587..1440654(-) (amiE) [Streptococcus oralis strain SF100]
ATGACAAAAGAAAGTAATGTAATTTTGACTGCTCGTGATATTGTCGTGGAATTTGACGTTCGTGACAAAGTTCTGACGGC
TATCCGAGGAGTTTCTCTGGACCTGATTGAAGGAGAAGTTCTTGCCTTGGTAGGTGAGTCTGGTTCTGGTAAATCTGTTT
TAACAAAAACCTTTACAGGGATGTTAGAAGACAATGGACGTATTGCCCAAGGAAGCATCGACTATCGTGGACAAGACTTG
ACTGCTCTTACTTCTAACAAGGAATGGGAGAAGATTCGTGGTGCTAAAATTGCGACCATCTTCCAAGACCCTATGACAAG
TTTGGATCCAATCAATACAATCGGTAGCCAAATCACTGAAGTGATCATTAAACACCAAGGGAAAACAGCTAAGGAAGCCA
AAGAGATGGCAATCGACTATATGAACAAGGTCGGAATCCCAGATGCTGAAAAACGTTTTGAAGAGTATCCTTTCCAATAT
TCTGGAGGGATGCGCCAACGTATCGTTATTGCGATTGCCCTTGCCTGTCGTCCAGATATCTTGATCTGTGACGAGCCAAC
AACGGCCCTTGATGTAACCATTCAAGCGCAAATCATTGATTTGCTTAAAACCTTGCAAAATGAGTACCACTTTACCATTA
TCTTTATCACCCATGACCTTGGTGTGGTAGCAAGTATTGCCGATAAGGTAGCGGTTATGTATGCTGGGGAAATTGTAGAA
TACGGTACTGTTGAGGAAGTCTTCTACGATCCACGTCATCCATACACTTGGAGTCTCTTGTCTAGCTTGCCACAGCTTGC
TGATGATAAAGGGGAATTGTACTCTATCCCAGGAACACCACCGTCTCTTTATACTGAGTTGAAAGGTGATGCCTTTGCCC
TTCGTTCAGATTATGCGATGCAAATTGATTTTGAAGAGAAAGCACCTAAGTTTTCAGTCACTGATACTCACTGGGCTAAG
ACTTGGTTGCTTCATGAGAATGCTCCTAAAGTTGAAAAACCTGGAGTCATTGCAGATTTGCATGACAAGATTCGTGATAA
AATGGGCTTTGCTCATCTAGAAGACTAG

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (239-301)

• ABC transporter (ABC_tran) (29-187)

3D structure

• AlphaFold DB: A0A7H9FDL5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	85.915	100	0.859
amiE	Streptococcus thermophilus LMG 18311	83.944	100	0.839
amiE	Streptococcus thermophilus LMD-9	83.944	100	0.839
oppD	Streptococcus mutans UA159	54.83	99.155	0.544