Detailed information NTG0517650

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: JC616_RS19865
• Genome accession: NZ_CP066126
• Coordinates: 4369248..4370756 (-)
• Length: 502 a.a.
• NCBI ID: WP_227104947.1
• Uniprot ID: -
• Organism: Chromobacterium rhizoryzae strain 32279
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4364248..4375756

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JC616_RS19835	-	4364301..4365197 (+)	897	WP_227104943.1	RimK family alpha-L-glutamate ligase	-
JC616_RS19840	purB	4365263..4366633 (+)	1371	WP_107800590.1	adenylosuccinate lyase	-
JC616_RS19850	-	4366904..4367725 (-)	822	WP_107800591.1	undecaprenyl-diphosphate phosphatase	-
JC616_RS19855	-	4367809..4368420 (-)	612	WP_107800592.1	thiol:disulfide interchange protein DsbA/DsbL	-
JC616_RS19860	-	4368448..4369098 (-)	651	WP_227104945.1	SPOR domain-containing protein	-
JC616_RS19865	comM	4369248..4370756 (-)	1509	WP_227104947.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
JC616_RS19870	-	4370761..4371048 (-)	288	WP_227104949.1	accessory factor UbiK family protein	-
JC616_RS19875	glnK	4371374..4371712 (+)	339	WP_227104951.1	P-II family nitrogen regulator	-
JC616_RS19880	-	4371742..4373055 (+)	1314	WP_107800596.1	ammonium transporter	-
JC616_RS19885	-	4373175..4373618 (-)	444	WP_227104953.1	ClpXP protease specificity-enhancing factor	-
JC616_RS19890	-	4373628..4374230 (-)	603	WP_039756141.1	glutathione S-transferase N-terminal domain-containing protein	-
JC616_RS19895	-	4374381..4375145 (-)	765	WP_107800598.1	cytochrome c1	-

Sequence

Protein

• Length: 502 a.a.
• Molecular weight: 53347.61 Da
• Isoelectric Point: 6.9944

>NTDB_id=517650 JC616_RS19865 WP_227104947.1 4369248..4370756(-) (comM) [Chromobacterium rhizoryzae strain 32279]
MTLAVVASRALAGLEAPEVAVEVHLANGLPAFTIVGLPDLEVKESRERVRAAILTSGFEFPARRITVNLAPADLPKDSGR
FDLPIAIGILAASGQVRCPRLAEYEIAGELALTGALRPVRGALAMACRTREAGRAFILPIASAKEAAVLEGMPLYGVSTL
VEACAFLNGLSELVPYRPEGGLPHSAPDYPDLQDIKGQPLARHALEVAAAGRHSLLMMGPPGTGKSMLAARLPGILPGMP
DEEALESAAVRSLGTDGFALDDWGVRPFRSPHHTASAVALVGGGSDPRPGEISLAHHGVLFLDELPEFDRKVLEVLREPL
EAGVIHISRAARQASFPARFQLIAAMNPCPCGYLGHFSGKCSCTPEQVGRYRGKISGPLLDRIDLHVEVQSLPAEQLVGG
AVGESSALVRERVETAYRLQLARQGKANAGLSGAELEAIGDFHAEALALLRQVLDKIGLSARSYHRILRVSRTIADLQGQ
AMVMREHVLQAIQLRRAAMPNG

Nucleotide

• Length: 1509 bp

>NTDB_id=517650 JC616_RS19865 WP_227104947.1 4369248..4370756(-) (comM) [Chromobacterium rhizoryzae strain 32279]
ATGACGCTGGCCGTGGTGGCAAGCCGGGCGCTGGCAGGGTTGGAAGCGCCCGAGGTCGCGGTGGAAGTGCATCTGGCCAA
CGGTTTGCCCGCATTCACCATTGTCGGCCTGCCTGACCTTGAGGTGAAGGAAAGCCGGGAGCGTGTGCGCGCGGCGATTT
TAACCTCGGGTTTTGAGTTTCCGGCCCGGCGCATCACCGTCAACCTGGCTCCGGCCGATCTGCCCAAGGACTCCGGCCGT
TTCGATCTGCCCATCGCCATCGGCATTCTGGCGGCCAGCGGACAGGTGCGTTGCCCCCGTTTGGCGGAGTATGAGATCGC
GGGAGAACTGGCTTTGACCGGGGCCTTGCGGCCGGTCCGCGGCGCCTTGGCGATGGCGTGCCGGACGCGGGAAGCGGGGC
GGGCCTTCATCTTGCCGATAGCCAGCGCCAAAGAGGCCGCGGTGCTGGAAGGCATGCCCTTGTACGGCGTGAGCACTCTG
GTGGAAGCCTGCGCCTTTCTCAACGGCCTCTCCGAGCTGGTACCGTATCGACCAGAAGGCGGTTTGCCTCATTCGGCCCC
GGACTACCCCGATCTACAAGACATCAAAGGCCAGCCGCTGGCGCGCCACGCGCTGGAAGTGGCCGCGGCCGGACGGCATA
GTCTTTTGATGATGGGGCCGCCCGGCACCGGCAAATCCATGTTGGCCGCGCGTCTGCCCGGCATCTTGCCCGGCATGCCG
GACGAAGAGGCGCTGGAGAGCGCCGCCGTGCGCTCCTTGGGGACCGACGGCTTCGCGCTGGACGATTGGGGCGTAAGGCC
GTTCCGCTCACCGCACCATACCGCGTCCGCGGTGGCGCTGGTGGGCGGCGGCAGCGATCCGCGGCCGGGAGAAATCAGCC
TGGCGCATCACGGCGTCTTGTTCCTGGACGAATTGCCCGAGTTCGATCGCAAGGTGCTGGAAGTGCTGCGCGAGCCCCTG
GAGGCCGGGGTGATCCACATCTCGCGCGCCGCGCGCCAAGCCAGTTTTCCCGCGCGCTTCCAGCTGATTGCGGCCATGAA
TCCCTGTCCGTGTGGTTATCTTGGGCATTTCAGCGGAAAATGCAGCTGCACGCCCGAGCAAGTGGGGCGCTATCGAGGTA
AAATCTCCGGTCCCTTATTGGATCGCATCGATTTGCACGTTGAAGTGCAGTCCTTGCCGGCGGAGCAGTTGGTGGGCGGG
GCTGTCGGCGAGTCCAGCGCTTTGGTGCGCGAACGGGTGGAGACGGCGTATCGTCTGCAATTGGCCCGGCAGGGCAAGGC
GAATGCCGGCTTGAGCGGGGCCGAACTGGAGGCGATTGGCGATTTTCACGCCGAGGCGCTGGCATTATTGCGGCAAGTTT
TGGACAAGATCGGCTTGTCTGCGCGCAGTTATCATCGGATACTTCGAGTTTCCAGAACCATTGCCGATTTACAGGGTCAG
GCAATGGTCATGCGGGAGCATGTGTTGCAGGCGATTCAATTACGACGCGCCGCAATGCCTAATGGCTAA

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (191-396)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (403-495)

• Subunit ChlI of Mg-chelatase (ChlI) (21-140)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio campbellii strain DS40M4	52.016	98.805	0.514
comM	Haemophilus influenzae Rd KW20	51.4	99.602	0.512
comM	Glaesserella parasuis strain SC1401	51.4	99.602	0.512
comM	Vibrio cholerae strain A1552	51.411	98.805	0.508
comM	Legionella pneumophila str. Paris	48.4	99.602	0.482
comM	Legionella pneumophila strain ERS1305867	48.4	99.602	0.482
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	45.02	100	0.45