Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | I6I02_RS00155 | Genome accession | NZ_CP066093 |
| Coordinates | 36620..37576 (+) | Length | 318 a.a. |
| NCBI ID | WP_013991262.1 | Uniprot ID | - |
| Organism | Streptococcus salivarius strain FDAARGOS_1045 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 31620..42576
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6I02_RS00115 (I6I02_00115) | - | 32517..32879 (+) | 363 | WP_002887019.1 | DUF1033 family protein | - |
| I6I02_RS00120 (I6I02_00120) | comGA/cglA/cilD | 32960..33901 (+) | 942 | WP_060971595.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| I6I02_RS00125 (I6I02_00125) | comYB | 33783..34883 (+) | 1101 | WP_198463594.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| I6I02_RS00130 (I6I02_00130) | comYC | 34880..35206 (+) | 327 | WP_002885815.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| I6I02_RS00135 (I6I02_00135) | comYD | 35166..35594 (+) | 429 | WP_269780043.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| I6I02_RS00140 (I6I02_00140) | comGE | 35626..35856 (+) | 231 | WP_051412000.1 | competence type IV pilus minor pilin ComGE | - |
| I6I02_RS00145 (I6I02_00145) | comYF | 35843..36280 (+) | 438 | WP_037601472.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| I6I02_RS00150 (I6I02_00150) | comGG | 36258..36575 (+) | 318 | WP_041817287.1 | competence type IV pilus minor pilin ComGG | - |
| I6I02_RS00155 (I6I02_00155) | comYH | 36620..37576 (+) | 957 | WP_013991262.1 | class I SAM-dependent methyltransferase | Machinery gene |
| I6I02_RS00160 (I6I02_00160) | - | 37633..38826 (+) | 1194 | WP_003095894.1 | acetate kinase | - |
| I6I02_RS00165 (I6I02_00165) | - | 39077..39274 (+) | 198 | WP_013991261.1 | helix-turn-helix transcriptional regulator | - |
| I6I02_RS00170 (I6I02_00170) | - | 39286..39942 (+) | 657 | WP_013991260.1 | CPBP family intramembrane glutamic endopeptidase | - |
| I6I02_RS00175 (I6I02_00175) | - | 40016..40462 (+) | 447 | WP_013991259.1 | hypothetical protein | - |
| I6I02_RS00180 (I6I02_00180) | - | 40575..41237 (+) | 663 | WP_013991258.1 | CPBP family intramembrane glutamic endopeptidase | - |
| I6I02_RS00185 (I6I02_00185) | proC | 41264..42034 (-) | 771 | WP_013991257.1 | pyrroline-5-carboxylate reductase | - |
Sequence
Protein
Download Length: 318 a.a. Molecular weight: 35809.68 Da Isoelectric Point: 4.3440
>NTDB_id=517331 I6I02_RS00155 WP_013991262.1 36620..37576(+) (comYH) [Streptococcus salivarius strain FDAARGOS_1045]
MNFEAIETAFELLLENVQTIENDLGTHAYDALIEQNSYYLGAEVANEVIIKNNEKLRALDLSKEEWRRAFQFLFIKLGQL
EALQANHQFTPDAIGFIILYLLEGLTKDDQLDILEIGSGTGNLAETLLNNSQKTLNYMGMEVDDLLIDLSASIADVVNSS
AVYIQEDAVRPHILKESDVIISDLPVGYYPNDEIASRFKVAATGEHTYAHHLLMEQSLKYLKKDGIAILLAPTNLLTSPQ
SDFLKKWLSGYADIIAVITLPEAAFGNKHNMKSIFVLKKQTENAPETFVYPLSDLQNPEILKDFTDNFQKWKSDNSIF
MNFEAIETAFELLLENVQTIENDLGTHAYDALIEQNSYYLGAEVANEVIIKNNEKLRALDLSKEEWRRAFQFLFIKLGQL
EALQANHQFTPDAIGFIILYLLEGLTKDDQLDILEIGSGTGNLAETLLNNSQKTLNYMGMEVDDLLIDLSASIADVVNSS
AVYIQEDAVRPHILKESDVIISDLPVGYYPNDEIASRFKVAATGEHTYAHHLLMEQSLKYLKKDGIAILLAPTNLLTSPQ
SDFLKKWLSGYADIIAVITLPEAAFGNKHNMKSIFVLKKQTENAPETFVYPLSDLQNPEILKDFTDNFQKWKSDNSIF
Nucleotide
Download Length: 957 bp
>NTDB_id=517331 I6I02_RS00155 WP_013991262.1 36620..37576(+) (comYH) [Streptococcus salivarius strain FDAARGOS_1045]
ATGAATTTTGAAGCAATTGAGACGGCCTTTGAGCTGTTGTTAGAAAATGTCCAAACCATTGAAAATGATCTTGGAACCCA
TGCTTACGATGCACTTATTGAGCAAAATTCCTATTATTTGGGGGCTGAGGTAGCTAATGAAGTCATCATCAAAAACAACG
AGAAATTACGTGCTCTTGATCTAAGTAAAGAGGAGTGGCGTCGTGCTTTTCAGTTCTTGTTTATCAAACTAGGGCAATTG
GAAGCTTTACAAGCCAATCACCAATTTACACCAGATGCTATTGGATTTATCATTCTTTACCTACTTGAAGGTTTGACCAA
GGACGACCAATTAGATATTTTAGAGATTGGTTCAGGGACAGGAAACTTGGCTGAAACTCTTCTAAATAATAGTCAGAAAA
CCCTTAATTATATGGGAATGGAAGTTGACGATCTCCTTATCGATTTGTCAGCTAGTATTGCTGATGTAGTGAATTCAAGT
GCAGTTTACATCCAAGAAGATGCTGTTCGACCACACATTCTCAAAGAGAGTGATGTTATTATCAGTGACCTACCTGTTGG
GTATTACCCAAATGATGAGATTGCGAGTCGTTTCAAGGTTGCAGCAACTGGTGAACACACCTATGCCCATCACCTTCTCA
TGGAGCAATCACTCAAGTACCTGAAGAAAGATGGTATTGCTATTCTTTTGGCACCAACTAATCTTTTGACAAGCCCACAA
AGTGACTTTCTTAAGAAATGGCTATCAGGATATGCTGATATTATTGCCGTTATCACTCTTCCAGAAGCAGCTTTTGGCAA
TAAACATAATATGAAGTCTATCTTCGTGCTTAAAAAACAAACTGAAAATGCTCCAGAGACCTTCGTTTATCCACTTAGCG
ATTTGCAAAACCCAGAGATCCTCAAGGATTTCACAGATAATTTCCAAAAATGGAAATCAGATAATTCCATTTTCTAG
ATGAATTTTGAAGCAATTGAGACGGCCTTTGAGCTGTTGTTAGAAAATGTCCAAACCATTGAAAATGATCTTGGAACCCA
TGCTTACGATGCACTTATTGAGCAAAATTCCTATTATTTGGGGGCTGAGGTAGCTAATGAAGTCATCATCAAAAACAACG
AGAAATTACGTGCTCTTGATCTAAGTAAAGAGGAGTGGCGTCGTGCTTTTCAGTTCTTGTTTATCAAACTAGGGCAATTG
GAAGCTTTACAAGCCAATCACCAATTTACACCAGATGCTATTGGATTTATCATTCTTTACCTACTTGAAGGTTTGACCAA
GGACGACCAATTAGATATTTTAGAGATTGGTTCAGGGACAGGAAACTTGGCTGAAACTCTTCTAAATAATAGTCAGAAAA
CCCTTAATTATATGGGAATGGAAGTTGACGATCTCCTTATCGATTTGTCAGCTAGTATTGCTGATGTAGTGAATTCAAGT
GCAGTTTACATCCAAGAAGATGCTGTTCGACCACACATTCTCAAAGAGAGTGATGTTATTATCAGTGACCTACCTGTTGG
GTATTACCCAAATGATGAGATTGCGAGTCGTTTCAAGGTTGCAGCAACTGGTGAACACACCTATGCCCATCACCTTCTCA
TGGAGCAATCACTCAAGTACCTGAAGAAAGATGGTATTGCTATTCTTTTGGCACCAACTAATCTTTTGACAAGCCCACAA
AGTGACTTTCTTAAGAAATGGCTATCAGGATATGCTGATATTATTGCCGTTATCACTCTTCCAGAAGCAGCTTTTGGCAA
TAAACATAATATGAAGTCTATCTTCGTGCTTAAAAAACAAACTGAAAATGCTCCAGAGACCTTCGTTTATCCACTTAGCG
ATTTGCAAAACCCAGAGATCCTCAAGGATTTCACAGATAATTTCCAAAAATGGAAATCAGATAATTCCATTTTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
69.841 |
99.057 |
0.692 |
| comYH | Streptococcus mutans UA140 |
69.841 |
99.057 |
0.692 |