Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   I6H78_RS01555 Genome accession   NZ_CP066059
Coordinates   330034..330933 (-) Length   299 a.a.
NCBI ID   WP_198459722.1    Uniprot ID   A0A7T4IT88
Organism   Streptococcus oralis strain FDAARGOS_1021     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 325034..335933
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H78_RS01540 (I6H78_01540) prsA 326432..327373 (-) 942 WP_000728082.1 peptidylprolyl isomerase PrsA -
  I6H78_RS01545 (I6H78_01545) - 327441..328154 (-) 714 WP_198459720.1 O-methyltransferase -
  I6H78_RS01550 (I6H78_01550) pepF 328156..329958 (-) 1803 WP_198459721.1 oligoendopeptidase F Regulator
  I6H78_RS01555 (I6H78_01555) coiA 330034..330933 (-) 900 WP_198459722.1 competence protein CoiA Machinery gene
  I6H78_RS01560 (I6H78_01560) - 331008..332156 (-) 1149 WP_198460214.1 DUF1887 family protein -
  I6H78_RS01565 (I6H78_01565) tehB 332334..333194 (-) 861 WP_198459723.1 SAM-dependent methyltransferase TehB -
  I6H78_RS01570 (I6H78_01570) smpB 333209..333676 (-) 468 WP_198459724.1 SsrA-binding protein SmpB -

Sequence

Protein


Download         Length: 299 a.a.        Molecular weight: 35360.45 Da        Isoelectric Point: 9.0862

>NTDB_id=516930 I6H78_RS01555 WP_198459722.1 330034..330933(-) (coiA) [Streptococcus oralis strain FDAARGOS_1021]
MFVARDAKGNLVNALEKDVTKQAYTCPACGGGLRLRQGQSIRTHFAHERLRDCIAIFENESPEHLGNKEALYHWAKKDCQ
VALEYALPEIQQIADVLVNEKLALEVQCSPLSQKLLGDRSQGYRSQGYQVIWLLGEKLWLKERLTQLQRGFLYYSQNMGF
YAWELDLKKQVLRLKYLLHQDLRGKLHFQVKEFPYGQGNLLEILRFPYQKQKLPRFAVVQDSTICHYIRQQLYYQTPYWM
KKQEAAYQQGDNLLNRQLDDWYPQVKPIESGDFLQIETDLTSYYRNFQAYYQKNPKNNR

Nucleotide


Download         Length: 900 bp        

>NTDB_id=516930 I6H78_RS01555 WP_198459722.1 330034..330933(-) (coiA) [Streptococcus oralis strain FDAARGOS_1021]
ATGTTTGTAGCCAGAGATGCCAAGGGGAATTTGGTAAATGCCCTCGAAAAAGATGTGACCAAGCAAGCTTATACTTGTCC
AGCCTGTGGAGGCGGACTACGGTTACGCCAAGGACAGAGCATTCGAACGCACTTTGCCCATGAAAGGTTAAGAGATTGCA
TCGCTATATTCGAGAATGAAAGTCCAGAACACTTGGGCAACAAAGAGGCCCTTTATCACTGGGCCAAGAAAGACTGTCAG
GTTGCCCTAGAGTACGCTCTTCCCGAGATCCAGCAGATAGCGGATGTTCTTGTCAATGAGAAACTAGCTCTGGAGGTTCA
GTGCAGCCCCTTGTCTCAAAAGCTTTTAGGTGATAGAAGCCAAGGATACCGTAGCCAAGGATATCAGGTTATCTGGCTAC
TGGGAGAAAAACTCTGGTTAAAAGAGCGATTAACACAATTGCAAAGGGGATTTCTCTATTATAGTCAAAATATGGGTTTC
TATGCTTGGGAACTAGATCTCAAAAAGCAAGTTTTGAGACTGAAATATCTTCTGCATCAGGATCTACGTGGCAAGCTTCA
TTTTCAGGTCAAGGAATTCCCCTATGGCCAAGGAAATCTCTTGGAAATTCTACGATTTCCTTATCAAAAACAAAAACTGC
CTCGTTTTGCAGTTGTGCAAGATTCCACTATTTGTCACTACATTCGCCAGCAGTTGTACTACCAAACGCCTTACTGGATG
AAAAAACAGGAGGCAGCCTATCAGCAAGGAGACAATCTATTAAACCGTCAACTAGACGACTGGTATCCTCAAGTCAAGCC
GATAGAATCAGGTGATTTTTTGCAGATTGAAACGGATTTGACTAGCTATTATAGAAATTTTCAGGCTTACTATCAAAAAA
ATCCGAAAAATAATCGCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(12-244)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7T4IT88

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Streptococcus pneumoniae Rx1

70.47

99.666

0.702
  coiA Streptococcus pneumoniae D39

70.47

99.666

0.702
  coiA Streptococcus pneumoniae R6

70.47

99.666

0.702
  coiA Streptococcus mitis NCTC 12261

70.47

99.666

0.702
  coiA Streptococcus pneumoniae TIGR4

70.134

99.666

0.699
  coiA Lactococcus lactis subsp. cremoris KW2

42.395

100

0.438