Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   I6H78_RS01550 Genome accession   NZ_CP066059
Coordinates   328156..329958 (-) Length   600 a.a.
NCBI ID   WP_198459721.1    Uniprot ID   A0A7T4IT66
Organism   Streptococcus oralis strain FDAARGOS_1021     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 323156..334958
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H78_RS01535 (I6H78_01535) ftsW 325021..326244 (-) 1224 WP_198459719.1 cell division peptidoglycan polymerase FtsW -
  I6H78_RS01540 (I6H78_01540) prsA 326432..327373 (-) 942 WP_000728082.1 peptidylprolyl isomerase PrsA -
  I6H78_RS01545 (I6H78_01545) - 327441..328154 (-) 714 WP_198459720.1 O-methyltransferase -
  I6H78_RS01550 (I6H78_01550) pepF 328156..329958 (-) 1803 WP_198459721.1 oligoendopeptidase F Regulator
  I6H78_RS01555 (I6H78_01555) coiA 330034..330933 (-) 900 WP_198459722.1 competence protein CoiA Machinery gene
  I6H78_RS01560 (I6H78_01560) - 331008..332156 (-) 1149 WP_198460214.1 DUF1887 family protein -
  I6H78_RS01565 (I6H78_01565) tehB 332334..333194 (-) 861 WP_198459723.1 SAM-dependent methyltransferase TehB -
  I6H78_RS01570 (I6H78_01570) smpB 333209..333676 (-) 468 WP_198459724.1 SsrA-binding protein SmpB -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 69719.71 Da        Isoelectric Point: 4.6205

>NTDB_id=516929 I6H78_RS01550 WP_198459721.1 328156..329958(-) (pepF) [Streptococcus oralis strain FDAARGOS_1021]
MVLQRHEINEKDTWDLSTIYPTDQAWEEALKDLTEKVQTASQYEGHLLDSADSLLEITEFSLDLERQVEKLYVYAHMKND
QDTREAKYQEYYAKAMTLYSQLEQAFSFYEPEFMEISEEQYAAFLEAQPKLRVYKHFFDKLLQKKDHVLSQREEELLAGA
GEIFGAASETFAILDNADISFPYVLDDEGKEVQLSHGTYIRLMESKNREVRRGAYEALYATYEQFQHTYAKTLQTNVKVQ
NYRAKVRNYKSARHAALAANVVPESVYDNLVAAVRKHLPLLHRYLNLRSKILGISDLKMYDVYTPLSSVEYSFTYEEALK
KAEEALAVLGDDYLSRVKRAFSERWIDVYENQGKRSGAYSGGSYDTNAFMLLNWQDNLDNLFTLVHETGHSMHSSYTRET
QPYVYGDYSIFLAEIASTTNENILTEKLLEEVEDDATRFAILNNFLDGFRGTVFRQTQFAEFEHAIHQADQNGEVLTSDF
LNKLYADLNQEYYGLSKEDNPQIQYEWARIPHFYYNYYVYQYSTGFAAASALAEKIVHGSQEDRDLYIDYLKAGKSDYPL
NVMRKAGVDMEKEDYLNDAFAVFERRLNEFEALVEKLGLA

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=516929 I6H78_RS01550 WP_198459721.1 328156..329958(-) (pepF) [Streptococcus oralis strain FDAARGOS_1021]
ATGGTATTACAACGACATGAAATAAATGAAAAAGATACATGGGATCTTTCGACAATCTACCCAACAGACCAGGCTTGGGA
AGAAGCCTTGAAAGATTTAACTGAAAAAGTACAAACAGCATCTCAGTATGAGGGACATCTCTTGGACAGCGCAGACAGTT
TGCTTGAGATCACAGAATTCTCACTCGACTTGGAACGCCAAGTTGAAAAGCTTTATGTCTATGCGCATATGAAAAATGAC
CAGGACACGCGTGAAGCCAAGTATCAAGAGTACTATGCTAAGGCAATGACCCTATACAGTCAGTTAGAACAAGCCTTTTC
ATTCTATGAACCTGAGTTTATGGAGATTAGCGAAGAGCAGTATGCGGCCTTCCTAGAAGCTCAACCAAAACTCCGAGTTT
ACAAGCACTTTTTTGACAAGCTTTTGCAAAAGAAAGACCATGTTCTTTCGCAACGTGAGGAAGAATTGCTTGCTGGAGCA
GGAGAAATCTTTGGCGCTGCTAGTGAAACCTTCGCTATTTTGGACAATGCGGATATTAGCTTTCCATACGTGCTTGATGA
CGAAGGCAAGGAAGTGCAACTCTCACACGGTACTTACATCCGTTTGATGGAGTCTAAAAACCGTGAAGTGCGCCGTGGTG
CTTATGAAGCCCTCTATGCGACTTACGAGCAATTCCAACACACTTATGCTAAGACCTTGCAGACAAATGTTAAGGTGCAA
AACTACCGTGCCAAAGTTCGCAACTATAAGAGTGCTCGCCATGCAGCCCTCGCAGCAAATGTTGTTCCAGAAAGTGTCTA
TGACAATCTAGTAGCAGCAGTTCGCAAGCACTTGCCACTCTTGCATCGATACCTTAACCTTCGTTCTAAAATCTTGGGTA
TTTCCGACCTCAAGATGTACGATGTCTACACACCACTATCTTCAGTAGAATACAGCTTTACCTACGAAGAAGCCTTGAAA
AAGGCAGAAGAAGCTTTGGCAGTTTTAGGTGACGACTACTTGAGCCGTGTCAAACGTGCCTTCAGTGAGCGTTGGATTGA
TGTCTATGAAAACCAAGGCAAGCGCTCTGGTGCCTACTCTGGTGGTTCTTATGATACCAATGCCTTTATGCTTCTCAACT
GGCAGGATAATCTAGATAATCTTTTTACTCTTGTTCATGAAACAGGTCACAGTATGCATTCAAGCTATACTCGTGAAACT
CAGCCTTATGTTTATGGAGATTACTCTATCTTCTTGGCAGAGATTGCCTCAACTACTAATGAAAATATCTTGACGGAGAA
ATTATTGGAAGAAGTAGAAGACGACGCAACACGCTTTGCTATCCTCAATAACTTCCTAGATGGTTTCCGTGGAACAGTCT
TCCGTCAAACTCAATTCGCTGAGTTTGAACATGCCATCCACCAAGCAGACCAGAATGGAGAAGTCTTGACAAGTGATTTC
CTAAATAAACTCTACGCTGACTTGAACCAAGAGTATTATGGACTCAGCAAGGAAGATAATCCTCAGATCCAATATGAGTG
GGCACGCATTCCACACTTCTACTATAACTACTATGTTTATCAATATTCAACTGGTTTTGCAGCTGCTTCAGCCTTGGCTG
AGAAGATTGTCCATGGAAGTCAAGAAGATCGTGACCTCTATATCGACTACCTCAAGGCAGGTAAGTCTGACTATCCACTC
AATGTTATGAGAAAAGCGGGAGTGGATATGGAAAAAGAAGACTATCTTAACGACGCTTTTGCAGTCTTTGAACGTCGCTT
GAACGAGTTTGAAGCCCTTGTTGAAAAATTGGGACTAGCTTAA

Domains

Predicted by InterproScan.

Peptidase family M3 (Peptidase_M3)

(202-581)

Oligopeptidase F (Peptidase_M3_N)

(112-181)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7T4IT66

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

67.45

99.333

0.67