Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   I6I32_RS05425 Genome accession   NZ_CP066041
Coordinates   1104998..1105756 (-) Length   252 a.a.
NCBI ID   WP_198464230.1    Uniprot ID   -
Organism   Streptococcus oralis strain FDAARGOS_1075     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1099998..1110756
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I32_RS05400 (I6I32_05400) pth 1100023..1100592 (-) 570 WP_198464229.1 aminoacyl-tRNA hydrolase -
  I6I32_RS05405 (I6I32_05405) ychF 1100666..1101781 (-) 1116 WP_001218702.1 redox-regulated ATPase YchF -
  I6I32_RS05410 (I6I32_05410) - 1101866..1102060 (-) 195 WP_000285184.1 DUF951 domain-containing protein -
  I6I32_RS05415 (I6I32_05415) dnaN 1102125..1103261 (-) 1137 WP_000581146.1 DNA polymerase III subunit beta -
  I6I32_RS05420 (I6I32_05420) dnaA 1103420..1104781 (-) 1362 WP_000660623.1 chromosomal replication initiator protein DnaA -
  I6I32_RS05425 (I6I32_05425) spo0J 1104998..1105756 (-) 759 WP_198464230.1 ParB/RepB/Spo0J family partition protein Regulator
  I6I32_RS05430 (I6I32_05430) htrA 1105814..1107010 (-) 1197 WP_125414985.1 S1C family serine protease Regulator
  I6I32_RS05435 (I6I32_05435) rlmH 1107196..1107675 (+) 480 WP_198464231.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  I6I32_RS05445 (I6I32_05445) comC/comC2 1107956..1108081 (+) 126 WP_000799678.1 competence-stimulating peptide ComC Regulator
  I6I32_RS05450 (I6I32_05450) comD 1108102..1109421 (+) 1320 WP_198464232.1 competence system sensor histidine kinase ComD Regulator
  I6I32_RS05455 (I6I32_05455) comE 1109418..1110170 (+) 753 WP_000866079.1 competence system response regulator transcription factor ComE Regulator

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29054.48 Da        Isoelectric Point: 8.2862

>NTDB_id=516658 I6I32_RS05425 WP_198464230.1 1104998..1105756(-) (spo0J) [Streptococcus oralis strain FDAARGOS_1075]
MEKFEMISISEIQKNPYQPRKEFDTDKLKELAQSIKENGLIQPIIVRQSPVIGYEILAGERRYRASLLAGLTSIPAVVKH
LSDQEMMIQSIIENLQRENLNPVEEARAYESLVEKGFTHTEIADKMGKSRPYITNFIRLLSLPEYILTEVENGKISQAHA
RSLVGLDKEQQDYFFQLIKNEDISVRKLEALLTDKKHKKQKKSDSFIKDEENQLKKLLGLSVEIKLSKKDTGKIIISFSS
QEEYDRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=516658 I6I32_RS05425 WP_198464230.1 1104998..1105756(-) (spo0J) [Streptococcus oralis strain FDAARGOS_1075]
ATGGAAAAATTTGAAATGATTTCTATCTCTGAAATACAAAAGAATCCTTACCAACCTCGGAAAGAATTTGATACAGATAA
ACTAAAGGAATTAGCTCAATCAATCAAAGAAAATGGGCTCATCCAACCAATCATCGTTCGTCAATCTCCTGTAATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGATATCGGGCTTCTCTCTTGGCTGGTCTGACCTCTATCCCAGCCGTTGTAAAGCAC
CTCTCAGATCAGGAAATGATGATCCAGTCAATCATTGAGAATTTGCAGAGAGAAAATTTAAATCCTGTTGAAGAAGCACG
CGCCTATGAATCTTTAGTAGAAAAAGGATTTACTCACACTGAGATAGCGGATAAAATGGGGAAATCTCGTCCTTATATCA
CTAATTTTATTCGTTTGCTTTCCCTACCAGAATATATCTTAACTGAAGTAGAAAATGGAAAAATTTCTCAAGCGCATGCA
CGTTCACTAGTTGGTTTGGATAAAGAGCAGCAAGACTATTTCTTCCAACTAATCAAAAATGAAGATATTTCTGTGAGAAA
GTTAGAAGCACTTCTTACAGATAAAAAACACAAGAAGCAAAAAAAAAGTGATTCTTTCATCAAAGACGAAGAAAATCAAT
TAAAAAAACTACTCGGTTTAAGTGTAGAAATTAAACTTTCAAAAAAAGATACTGGAAAGATTATTATCTCCTTTTCAAGT
CAAGAAGAATACGATAGAATTATTAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(145-192)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.988

100

0.512