Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEC/celB   Type   Machinery gene
Locus tag   I6I32_RS01735 Genome accession   NZ_CP066041
Coordinates   349761..352001 (-) Length   746 a.a.
NCBI ID   WP_198464757.1    Uniprot ID   -
Organism   Streptococcus oralis strain FDAARGOS_1075     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 344761..357001
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I32_RS01715 (I6I32_01715) - 346528..348192 (-) 1665 WP_198464756.1 molecular chaperone HscC -
  I6I32_RS01720 (I6I32_01720) rplT 348367..348726 (-) 360 WP_000124830.1 50S ribosomal protein L20 -
  I6I32_RS01725 (I6I32_01725) rpmI 348778..348978 (-) 201 WP_001125942.1 50S ribosomal protein L35 -
  I6I32_RS01730 (I6I32_01730) infC 349011..349541 (-) 531 WP_000848184.1 translation initiation factor IF-3 -
  I6I32_RS01735 (I6I32_01735) comEC/celB 349761..352001 (-) 2241 WP_198464757.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  I6I32_RS01740 (I6I32_01740) comEA/celA/cilE 351985..352638 (-) 654 WP_198464758.1 helix-hairpin-helix domain-containing protein Machinery gene
  I6I32_RS01745 (I6I32_01745) - 352706..353275 (-) 570 WP_198464759.1 GNAT family N-acetyltransferase -
  I6I32_RS01750 (I6I32_01750) ald 353451..354563 (+) 1113 WP_198464760.1 alanine dehydrogenase -
  I6I32_RS01755 (I6I32_01755) - 354616..355602 (-) 987 WP_198464761.1 PhoH family protein -
  I6I32_RS01760 (I6I32_01760) - 355683..355898 (-) 216 WP_001232084.1 YozE family protein -
  I6I32_RS01765 (I6I32_01765) - 355895..356500 (-) 606 WP_198464762.1 GrpB family protein -

Sequence


Protein


Download         Length: 746 a.a.        Molecular weight: 84385.49 Da        Isoelectric Point: 8.7301

>NTDB_id=516623 I6I32_RS01735 WP_198464757.1 349761..352001(-) (comEC/celB) [Streptococcus oralis strain FDAARGOS_1075]
MSQWIKNFPIPLIYLSFLLLWLHYAIFGASYLALLGFVFLLICLFLQFPWKSTGKVLAICGVFGFWFLFQNWQQTQASQN
LVDSVERVRILPDTIKVNGDSLSFRGKADGRTFQVYYKLQSEEEKEHFQALTDLHEIELEGKVSEPEGQRNFGGFDYQAY
LKTQGIYQTLTIKSIQSMKQVSSWDIGENLSSIRRKAVVWIKAHFPDPMRNYMTGLLLGHLDTDFEEMNELYSSLGIIHL
FALSGMQVGFFMDAFKKLLLRLGLTQEKLKWLTYPFSLIYAGLTGFSASVIRSLLQKLLAQHSVKGLDNFALTILVLFII
MPNFFLTAGGVLSCAYAFILTMTSKEGDGIKAVARESLVISLGILPILSVYFAEFQPWSILLTFVFSFLFDVVFLPLLSI
LFILSFVYPVTQFNLVFEWLENIIRLVSQLTSRPLVFGQPNAWLLILLLVSLALVYDMRKNIKRLAGVILFIVGLFFLTK
HPLENEITMLDVGQGESIFLRDVTGKTILIDVGGKAESDKKIQAWQEKATTSNAQRTLIPYLKSRGVDKIDQLILTNTDK
EHIGDLLEVTKAFHVGEILVSKGSLTQKEFVAELEASQNKVRSVAAGENLPIFGSQLEVLSPRQIGDGDRDGSLVLYGKL
LDKHFLFTGNLKEKGEKDLLKQYPDLEVDVLKAGQHGAKTSSNPAFLEKLNPEITLISVGKNNRAKLPHQETLTRLESIK
SKIYRTDQQGAIRFKGWNSWRIETVL

Nucleotide


Download         Length: 2241 bp        

>NTDB_id=516623 I6I32_RS01735 WP_198464757.1 349761..352001(-) (comEC/celB) [Streptococcus oralis strain FDAARGOS_1075]
ATGTCACAGTGGATTAAGAATTTCCCTATCCCCCTAATCTATCTGAGTTTTCTGTTACTCTGGCTTCACTACGCCATTTT
TGGAGCGTCCTATCTTGCTTTACTAGGCTTTGTTTTTCTACTCATCTGTCTCTTTCTTCAATTTCCTTGGAAATCGACTG
GAAAAGTTTTAGCGATTTGCGGAGTTTTTGGATTTTGGTTTTTGTTTCAAAACTGGCAACAGACACAAGCTAGTCAAAAC
CTAGTGGATTCTGTTGAGAGGGTACGGATTTTACCAGATACTATCAAAGTCAATGGAGATAGTCTGTCCTTTCGGGGCAA
GGCTGACGGCCGTACCTTCCAAGTTTACTATAAACTCCAGTCCGAGGAGGAGAAAGAGCACTTTCAAGCCTTGACAGATC
TTCACGAGATAGAGCTAGAAGGGAAAGTCTCTGAACCTGAAGGTCAGAGGAATTTTGGTGGCTTTGACTACCAAGCCTAT
CTGAAAACTCAAGGGATTTACCAGACACTGACTATCAAGAGTATCCAGTCAATGAAACAGGTTAGCAGTTGGGATATAGG
AGAAAATCTGTCTAGTATACGTCGAAAGGCTGTAGTTTGGATCAAGGCGCACTTTCCAGACCCTATGCGCAACTATATGA
CAGGGCTGTTATTAGGACATCTAGATACGGACTTCGAGGAGATGAATGAGCTCTATTCCAGTCTTGGAATTATCCATCTC
TTTGCCTTGTCGGGTATGCAAGTGGGCTTCTTTATGGATGCCTTTAAGAAACTCCTCTTGCGATTGGGCTTGACCCAAGA
AAAGTTGAAGTGGCTAACTTATCCCTTTTCTCTTATCTATGCAGGTCTGACAGGATTTTCAGCTTCGGTCATTCGCAGTC
TCTTGCAAAAGTTACTGGCCCAACATAGTGTTAAGGGGTTGGATAATTTTGCCTTGACGATCCTTGTCCTTTTTATCATT
ATGCCAAACTTTTTCCTAACTGCAGGAGGAGTCTTGTCCTGCGCTTATGCTTTTATCTTGACCATGACTAGCAAAGAAGG
CGATGGGATCAAGGCTGTTGCCAGAGAAAGTTTGGTCATTTCTTTGGGAATATTGCCCATTCTATCCGTTTATTTTGCAG
AATTTCAGCCTTGGTCTATCCTTTTGACCTTTGTCTTTTCTTTTCTGTTTGATGTGGTATTCTTACCGCTTTTGTCCATC
TTATTCATCCTGTCTTTTGTTTACCCAGTCACTCAGTTTAACCTTGTCTTTGAGTGGTTGGAGAACATCATTCGCTTGGT
ATCGCAGCTGACAAGCAGGCCTCTGGTCTTTGGTCAACCCAACGCATGGCTTTTGATTCTACTGTTAGTTTCATTAGCCT
TGGTCTATGATATGAGGAAAAACATCAAAAGACTAGCAGGAGTCATTCTCTTTATTGTGGGGCTCTTTTTCCTGACCAAG
CATCCACTTGAAAATGAAATCACCATGCTGGATGTAGGGCAAGGAGAAAGTATTTTCCTACGGGATGTAACTGGGAAAAC
TATTCTCATAGATGTAGGAGGTAAAGCAGAATCTGACAAGAAAATCCAAGCTTGGCAGGAAAAGGCGACGACCAGCAATG
CCCAGAGAACCTTGATTCCCTACCTTAAAAGTCGAGGAGTAGACAAGATTGACCAGCTGATTTTGACAAATACAGATAAG
GAGCATATTGGCGATTTGCTAGAAGTAACAAAGGCTTTCCATGTCGGAGAGATTTTAGTATCAAAAGGAAGTCTGACACA
GAAGGAATTTGTAGCGGAACTAGAAGCAAGTCAAAACAAGGTACGTAGTGTGGCAGCTGGGGAGAATTTACCGATTTTTG
GAAGTCAGTTAGAAGTCCTATCTCCAAGGCAGATTGGAGATGGGGATCGTGATGGTTCCCTGGTTCTTTATGGAAAACTC
TTAGATAAGCACTTTCTCTTCACAGGAAACTTGAAAGAGAAGGGAGAGAAGGATCTTCTAAAGCAATACCCTGATTTAGA
GGTGGATGTCTTGAAAGCAGGCCAGCATGGTGCTAAAACATCATCAAATCCAGCTTTTCTAGAAAAACTCAACCCAGAGA
TTACTCTCATTTCAGTGGGTAAGAACAATCGTGCCAAACTCCCCCATCAGGAAACCTTGACACGACTAGAATCCATCAAG
AGTAAGATTTATCGAACTGACCAGCAAGGAGCTATCCGCTTTAAAGGATGGAATAGTTGGCGAATTGAAACGGTTCTATA
A


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEC/celB Streptococcus mitis SK321

87.919

99.866

0.878

  comEC/celB Streptococcus mitis NCTC 12261

87.383

99.866

0.873

  comEC/celB Streptococcus pneumoniae Rx1

86.174

99.866

0.861

  comEC/celB Streptococcus pneumoniae D39

86.174

99.866

0.861

  comEC/celB Streptococcus pneumoniae R6

86.174

99.866

0.861

  comEC/celB Streptococcus pneumoniae TIGR4

86.174

99.866

0.861

  comEC Lactococcus lactis subsp. cremoris KW2

44.595

99.196

0.442