Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   I6I32_RS01500 Genome accession   NZ_CP066041
Coordinates   304127..305083 (-) Length   318 a.a.
NCBI ID   WP_125397696.1    Uniprot ID   A0A3R9IEQ5
Organism   Streptococcus oralis strain FDAARGOS_1075     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 299127..310083
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I32_RS01480 (I6I32_01480) ftsW 299171..300394 (-) 1224 WP_000703342.1 cell division peptidoglycan polymerase FtsW -
  I6I32_RS01485 (I6I32_01485) prsA 300582..301523 (-) 942 WP_000728082.1 peptidylprolyl isomerase PrsA -
  I6I32_RS01490 (I6I32_01490) - 301591..302304 (-) 714 WP_198464734.1 O-methyltransferase -
  I6I32_RS01495 (I6I32_01495) pepF 302306..304108 (-) 1803 WP_125397695.1 oligoendopeptidase F Regulator
  I6I32_RS01500 (I6I32_01500) coiA 304127..305083 (-) 957 WP_125397696.1 competence protein CoiA Machinery gene
  I6I32_RS01505 (I6I32_01505) - 305160..306308 (-) 1149 WP_198464735.1 DUF1887 family protein -
  I6I32_RS01510 (I6I32_01510) tehB 306486..307346 (-) 861 WP_198464736.1 SAM-dependent methyltransferase TehB -
  I6I32_RS01515 (I6I32_01515) smpB 307361..307828 (-) 468 WP_001051743.1 SsrA-binding protein SmpB -

Sequence

Protein


Download         Length: 318 a.a.        Molecular weight: 37953.46 Da        Isoelectric Point: 9.4738

>NTDB_id=516620 I6I32_RS01500 WP_125397696.1 304127..305083(-) (coiA) [Streptococcus oralis strain FDAARGOS_1075]
MFVARDAKGNLVNALEKDVTKQPYTCPACGGGLRLRQGQSIRTHFAHERLRDCIAIFENESPEHLGNKEALYHWAKKDNQ
VALEYSLPEIQQVADVLVNEKLALEVQCSPLSQKLLGDRSQGYRSQGYQVIWLLGEKLWLKERLTQLQRGFLYFSQNMGF
FVWELDLKRKILRLKYLLHQDLRGKLHFQVKEFPYGQGNLLEILRFPYQKQKLPRFAVVQDSTICHYIRQQLYYQTSYWM
KKQEEAYYQRDNLLNHQLDDWYPQVRPIESGDFLQIETDLTSYYRNFQAYYQKNPKNNRQKLYPPAFYHLYFSKNVVK

Nucleotide


Download         Length: 957 bp        

>NTDB_id=516620 I6I32_RS01500 WP_125397696.1 304127..305083(-) (coiA) [Streptococcus oralis strain FDAARGOS_1075]
ATGTTTGTAGCTAGAGATGCCAAGGGGAATTTGGTGAATGCCCTTGAAAAAGATGTGACAAAGCAGCCTTACACCTGCCC
AGCCTGTGGGGGCGGACTACGATTACGCCAAGGACAGAGTATTCGAACGCATTTTGCCCATGAAAGGTTAAGAGATTGTA
TTGCCATTTTTGAAAATGAAAGTCCAGAACACTTGGGCAACAAAGAGGCCCTTTATCACTGGGCCAAGAAGGACAATCAG
GTCGCCTTAGAATATAGTTTGCCTGAGATTCAGCAGGTTGCGGATGTTCTCGTCAATGAGAAACTAGCTCTGGAGGTTCA
GTGCAGCCCCTTGTCTCAAAAGCTTTTAGGCGATAGAAGTCAAGGATACCGTAGCCAAGGCTATCAGGTTATCTGGCTAC
TGGGAGAAAAACTCTGGTTAAAAGAGCGATTAACACAACTGCAAAGGGGATTCCTCTATTTTAGTCAAAATATGGGTTTC
TTTGTTTGGGAACTGGATCTCAAAAGGAAAATTTTGAGACTCAAATATCTTTTGCATCAGGACCTACGTGGCAAGCTTCA
TTTTCAGGTCAAAGAATTTCCCTATGGTCAAGGAAATCTCTTGGAAATCCTACGATTTCCTTATCAAAAACAAAAACTAC
CTCGTTTTGCAGTTGTGCAAGATTCCACTATCTGTCACTACATTCGCCAGCAGTTGTACTACCAAACGTCCTACTGGATG
AAGAAGCAGGAGGAAGCTTATTATCAAAGAGACAATCTATTAAACCATCAACTGGACGACTGGTATCCCCAGGTCAGACC
GATAGAGTCAGGTGATTTTTTGCAGATTGAAACGGATTTGACTAGCTATTATAGAAATTTTCAGGCTTACTATCAAAAAA
ATCCGAAAAATAATCGCCAAAAGCTCTATCCACCAGCCTTTTATCACTTATATTTCTCAAAAAATGTGGTAAAATAG

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(13-249)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3R9IEQ5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Streptococcus pneumoniae Rx1

69.182

100

0.692
  coiA Streptococcus pneumoniae D39

69.182

100

0.692
  coiA Streptococcus pneumoniae R6

69.182

100

0.692
  coiA Streptococcus pneumoniae TIGR4

68.868

100

0.689
  coiA Streptococcus mitis NCTC 12261

68.868

100

0.689
  coiA Lactococcus lactis subsp. cremoris KW2

42.154

100

0.431