Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   I6I32_RS01495 Genome accession   NZ_CP066041
Coordinates   302306..304108 (-) Length   600 a.a.
NCBI ID   WP_125397695.1    Uniprot ID   -
Organism   Streptococcus oralis strain FDAARGOS_1075     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 297306..309108
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I32_RS01480 (I6I32_01480) ftsW 299171..300394 (-) 1224 WP_000703342.1 cell division peptidoglycan polymerase FtsW -
  I6I32_RS01485 (I6I32_01485) prsA 300582..301523 (-) 942 WP_000728082.1 peptidylprolyl isomerase PrsA -
  I6I32_RS01490 (I6I32_01490) - 301591..302304 (-) 714 WP_198464734.1 O-methyltransferase -
  I6I32_RS01495 (I6I32_01495) pepF 302306..304108 (-) 1803 WP_125397695.1 oligoendopeptidase F Regulator
  I6I32_RS01500 (I6I32_01500) coiA 304127..305083 (-) 957 WP_125397696.1 competence protein CoiA Machinery gene
  I6I32_RS01505 (I6I32_01505) - 305160..306308 (-) 1149 WP_198464735.1 DUF1887 family protein -
  I6I32_RS01510 (I6I32_01510) tehB 306486..307346 (-) 861 WP_198464736.1 SAM-dependent methyltransferase TehB -
  I6I32_RS01515 (I6I32_01515) smpB 307361..307828 (-) 468 WP_001051743.1 SsrA-binding protein SmpB -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 69942.85 Da        Isoelectric Point: 4.6025

>NTDB_id=516619 I6I32_RS01495 WP_125397695.1 302306..304108(-) (pepF) [Streptococcus oralis strain FDAARGOS_1075]
MVLQRHEINEKDTWDLSTIYPTDQAWEEALKDLTEKVQTASQYEGHLLDSADSLLEITEFSLDLERQVEKLYVYAHMKND
QDTREAKYQEYYAKAMTLYSQLEQAFSFYEPEFMEIREEQYADFLEAQPKLQVYKHFFDKLLQKKDHVLSQREEELLAGA
GEIFGSASETFAILDNADISFPYVLDDEGKEVQLSHGTYIHLMESKNREVRRGAYEALYATYEQFQHTYAKTLQTNVKVQ
NYRAKVRNYKSARHAALAANFVPESVYDNLVAAVRKHLPLLHRYLELRSKILGISDLKMYDVYTPLSSVDYSFTYEEALK
KAEEALAVLGDDYLSRVKRAFSERWIDVYENQGKRSGAYSGGSYDTNAFMLLNWQDNLDNLFTLVHETGHSMHSSYTRET
QPYVYGDYSIFLAEIASTTNENILTEKLLEEVEDDATRFAILNNFLDGFRGTVFRQTQFAEFEHAIHQADQNGEVLTSDF
LNKLYADLNQEYYGLSKEDNPQIQYEWARIPHFYYNYYVYQYSTGFAAASALAEKIVHGSQEDRDRYIDYLKAGKSDYPL
YVMRKAGVDMEKEDYLNDAFAVFERRLNEFEALVEKLGLA

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=516619 I6I32_RS01495 WP_125397695.1 302306..304108(-) (pepF) [Streptococcus oralis strain FDAARGOS_1075]
ATGGTATTACAACGACATGAAATAAATGAAAAAGATACATGGGATCTTTCAACAATCTACCCAACAGACCAGGCTTGGGA
AGAAGCCTTGAAAGATTTAACTGAAAAAGTACAAACAGCATCTCAGTATGAGGGACATCTCTTAGACAGCGCAGACAGTT
TGCTTGAGATCACAGAATTTTCACTTGATTTGGAACGCCAAGTTGAAAAGCTTTATGTCTATGCACATATGAAAAATGAC
CAGGACACGCGTGAAGCCAAGTATCAAGAGTACTATGCTAAGGCAATGACCCTATACAGTCAGTTAGAACAAGCCTTTTC
ATTCTATGAACCTGAGTTTATGGAGATTAGGGAAGAGCAGTATGCGGATTTCCTAGAAGCTCAACCAAAACTCCAAGTTT
ACAAGCACTTTTTTGACAAGCTCTTGCAAAAGAAAGACCATGTTCTTTCGCAACGTGAGGAAGAATTGCTTGCTGGAGCA
GGAGAAATCTTTGGTTCTGCTAGTGAAACCTTCGCTATTTTGGACAATGCGGATATTAGCTTCCCATACGTTCTTGATGA
CGAAGGCAAGGAAGTGCAACTCTCACATGGTACTTACATCCATTTGATGGAGTCTAAAAACCGTGAAGTGCGTCGTGGTG
CCTATGAAGCCCTTTATGCGACTTACGAGCAATTCCAACACACTTATGCCAAGACCTTGCAGACAAATGTTAAGGTGCAA
AACTACCGTGCCAAAGTTCGCAACTATAAGAGTGCTCGCCATGCAGCCCTCGCAGCAAACTTTGTTCCAGAAAGTGTCTA
TGACAATCTAGTTGCAGCAGTTCGCAAGCATTTGCCGCTCTTGCATCGTTACCTAGAACTTCGTTCTAAAATCTTGGGTA
TTTCCGACCTCAAGATGTACGATGTCTACACACCGCTTTCGTCAGTAGATTATAGCTTTACCTACGAAGAAGCCTTGAAA
AAGGCAGAAGAAGCTTTGGCAGTTTTAGGTGACGACTACTTGAGCCGTGTTAAACGTGCCTTCAGTGAGCGTTGGATTGA
TGTCTATGAAAACCAAGGCAAGCGTTCTGGTGCCTACTCTGGTGGTTCTTACGATACCAATGCCTTTATGCTTCTCAACT
GGCAGGACAATCTAGATAATCTCTTTACTCTTGTCCATGAAACAGGTCACAGTATGCACTCTAGCTATACTCGTGAAACC
CAACCTTATGTTTACGGAGATTATTCTATCTTCTTGGCTGAGATTGCCTCAACGACTAACGAAAATATCTTGACAGAGAA
ATTGTTGGAAGAAGTAGAAGACGACGCAACGCGCTTTGCTATTCTCAATAACTTCCTAGATGGTTTCCGTGGAACAGTTT
TCCGTCAAACTCAATTCGCTGAGTTTGAACATGCCATCCACCAAGCAGACCAAAATGGAGAAGTCTTGACAAGTGATTTC
CTCAATAAGCTCTACGCTGACTTGAACCAAGAGTACTATGGACTCAGCAAGGAAGACAATCCTCAGATCCAATACGAGTG
GGCACGCATTCCTCACTTCTACTATAACTACTATGTTTATCAGTATTCAACAGGTTTTGCAGCTGCTTCAGCCTTGGCTG
AGAAGATTGTCCATGGTAGTCAAGAAGACCGTGACCGCTATATCGACTACCTCAAAGCAGGTAAATCAGACTATCCACTC
TATGTCATGAGAAAAGCGGGTGTTGATATGGAAAAAGAAGACTATCTTAACGATGCCTTTGCAGTCTTTGAACGTCGCTT
GAACGAGTTTGAAGCCCTTGTTGAAAAATTGGGACTAGCTTAA

Domains

Predicted by InterproScan.

Peptidase family M3 (Peptidase_M3)

(202-581)

Oligopeptidase F (Peptidase_M3_N)

(112-181)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

67.45

99.333

0.67