Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEC/celB   Type   Machinery gene
Locus tag   I6H77_RS00680 Genome accession   NZ_CP066021
Coordinates   141857..144097 (-) Length   746 a.a.
NCBI ID   WP_000083028.1    Uniprot ID   A0A7H9FC31
Organism   Streptococcus oralis strain FDAARGOS_1020     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 136857..149097
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H77_RS00660 (I6H77_00660) - 138625..140289 (-) 1665 WP_000635029.1 molecular chaperone HscC -
  I6H77_RS00665 (I6H77_00665) rplT 140463..140822 (-) 360 WP_000124830.1 50S ribosomal protein L20 -
  I6H77_RS00670 (I6H77_00670) rpmI 140874..141074 (-) 201 WP_001125942.1 50S ribosomal protein L35 -
  I6H77_RS00675 (I6H77_00675) infC 141107..141637 (-) 531 WP_000848184.1 translation initiation factor IF-3 -
  I6H77_RS00680 (I6H77_00680) comEC/celB 141857..144097 (-) 2241 WP_000083028.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  I6H77_RS00685 (I6H77_00685) comEA/celA/cilE 144081..144731 (-) 651 WP_000452010.1 helix-hairpin-helix domain-containing protein Machinery gene
  I6H77_RS00690 (I6H77_00690) - 144798..145367 (-) 570 WP_000443753.1 GNAT family N-acetyltransferase -
  I6H77_RS00695 (I6H77_00695) ald 145544..146656 (+) 1113 WP_000904713.1 alanine dehydrogenase -
  I6H77_RS00700 (I6H77_00700) - 146707..147693 (-) 987 WP_000658168.1 PhoH family protein -
  I6H77_RS00705 (I6H77_00705) - 147774..147989 (-) 216 WP_001232091.1 YozE family protein -
  I6H77_RS00710 (I6H77_00710) - 147986..148591 (-) 606 WP_000727655.1 GrpB family protein -

Sequence


Protein


Download         Length: 746 a.a.        Molecular weight: 84710.83 Da        Isoelectric Point: 8.6035

>NTDB_id=516432 I6H77_RS00680 WP_000083028.1 141857..144097(-) (comEC/celB) [Streptococcus oralis strain FDAARGOS_1020]
MSQRIKNFPIPLIYLSFLLLWLYFVILGASYLALLGFVFLLVCLFFQFPWKSAGKVLAICGVFGIWFLFQNWQQTQASQN
LVDSVERVRILPDTIKVNGDSLSFRGKAEGRTFQVYYKLQSEEEKELFQALTDLHEIELEGKLSEPEGQRNFGGFDYRAY
LKTQGIYQTLTIKSIQSLKQVSSWDIGENLSALRRKAVVWIKAHFPDPMRNYMTGLLLGHLDTDFEEMNELYSSLGIIHL
FALSGMQVGFFMDAFKKLLLRLGLTQEKLKWLTYPFSLIYAGLTGFSASVIRSLLQKLLAQHGVKGLDNFALTVLVLFII
MPNFFLTAGGVLSCAYAFILTMTSKEGEGLKAVARESMVISLGILPILSFYFAEFQPWSILLTFVFSFLFDVVFLPLLSI
LFILSFVYPVTQFNFVFEWLECIIRLVSQLASRPLVFGQPNAWFLILLLVSLALVYDFRKNIKRIAGVILFIVGLFFLTK
HPLENEITMLDVGQGESIFLRDVTGKTILIDVGGKAESDKKIQAWQEKATTSNAQRTLIPYLKSRGVDKIDQLILTNTDK
EHVGDLLEVTKAFHVGEILVSKGSLTQKDFVAELEASQTKVRSVTEGDNFSIFGSQLEVLSPRQIGDGDRDDSLVLYGKL
LDKHFLFTGNLEEKREKDLLKHYPDLEVDVLKASQHGAKTSSNPTFLEKIKPEITLISVGKNNRAKLPHQESLTRMESIK
SKIYRTDQQGAIRFTGWNSWRIETVR

Nucleotide


Download         Length: 2241 bp        

>NTDB_id=516432 I6H77_RS00680 WP_000083028.1 141857..144097(-) (comEC/celB) [Streptococcus oralis strain FDAARGOS_1020]
ATGTCACAGCGGATTAAGAATTTCCCTATCCCCTTAATCTATCTGAGTTTTCTGTTACTCTGGCTTTACTTTGTCATTTT
AGGAGCGTCCTATCTCGCACTGCTAGGTTTTGTTTTTTTGCTGGTCTGCCTCTTTTTCCAATTTCCTTGGAAATCGGCTG
GTAAAGTTCTAGCGATTTGTGGAGTTTTTGGAATTTGGTTTTTGTTTCAAAACTGGCAACAGACACAAGCTAGTCAGAAC
CTAGTGGATTCTGTTGAAAGGGTACGGATTTTACCAGATACCATCAAAGTCAATGGAGACAGTCTGTCCTTTCGGGGCAA
GGCTGAGGGCCGCACCTTCCAAGTTTATTATAAACTCCAGTCCGAGGAAGAGAAAGAGCTCTTTCAGGCCTTAACAGACC
TTCACGAGATAGAGCTAGAAGGAAAACTTTCTGAGCCTGAAGGGCAGAGAAATTTTGGTGGATTTGACTACCGAGCCTAT
CTGAAGACTCAGGGAATTTACCAGACACTGACTATCAAGAGCATCCAGTCACTTAAACAGGTTAGCAGTTGGGATATAGG
TGAAAATTTGTCGGCTTTACGTCGAAAGGCTGTAGTTTGGATCAAGGCGCACTTTCCAGACCCTATGCGCAACTATATGA
CAGGGCTTCTTTTAGGACATTTGGACACGGATTTTGAGGAGATGAATGAGCTTTATTCCAGTCTTGGAATTATCCATCTA
TTTGCCTTGTCAGGTATGCAAGTGGGCTTCTTTATGGATGCCTTTAAGAAACTCCTCTTGCGATTGGGCTTGACCCAAGA
AAAGTTGAAGTGGCTAACTTATCCCTTTTCTCTTATCTATGCAGGTCTGACAGGATTTTCAGCATCTGTCATTCGCAGTC
TCTTGCAAAAGTTACTGGCCCAACATGGTGTTAAGGGTTTGGATAATTTTGCCTTGACGGTCCTTGTCCTCTTTATCATC
ATGCCCAACTTTTTCTTGACAGCTGGAGGGGTCTTGTCCTGCGCTTATGCTTTTATCTTGACTATGACAAGCAAAGAAGG
GGAGGGGCTCAAGGCTGTTGCCAGAGAAAGTATGGTCATTTCTTTGGGAATATTGCCCATTCTATCCTTTTATTTTGCAG
AATTTCAGCCTTGGTCTATCCTTTTGACCTTTGTTTTTTCCTTTCTGTTTGATGTGGTCTTCTTGCCACTTTTGTCCATC
TTATTCATTCTGTCTTTTGTTTACCCAGTCACTCAGTTTAACTTTGTCTTTGAGTGGTTGGAGTGTATCATTCGCTTGGT
ATCGCAGCTGGCAAGTAGGCCCCTGGTCTTTGGTCAACCCAATGCGTGGTTTTTGATTCTTCTCTTAGTTTCATTAGCTT
TAGTCTATGATTTTAGGAAAAATATTAAAAGAATAGCAGGAGTCATTCTCTTTATTGTGGGGCTCTTTTTCCTGACCAAG
CATCCACTTGAAAATGAAATTACCATGCTAGATGTTGGGCAAGGGGAGAGTATTTTCCTACGGGATGTAACTGGTAAAAC
TATTCTCATAGATGTAGGAGGTAAAGCAGAATCTGACAAGAAAATACAAGCTTGGCAGGAAAAGGCGACGACCAGCAATG
CCCAGAGAACTTTGATTCCCTATCTTAAAAGTCGAGGAGTAGATAAGATTGACCAGCTGATTTTGACCAATACAGACAAG
GAGCATGTTGGCGATTTGCTGGAGGTGACCAAGGCTTTCCATGTTGGAGAGATTTTAGTATCAAAAGGAAGTCTGACACA
GAAGGATTTTGTGGCAGAATTAGAAGCAAGTCAAACTAAGGTGCGCAGTGTGACAGAGGGGGATAATTTTTCGATTTTTG
GAAGTCAGTTAGAAGTCCTATCTCCAAGGCAGATTGGAGATGGGGATCGTGATGATTCTTTGGTTCTTTATGGAAAACTC
TTAGATAAGCACTTTCTCTTCACAGGAAATTTGGAGGAAAAAAGAGAGAAGGACTTGTTGAAGCATTATCCTGACCTAGA
GGTGGATGTCTTGAAAGCAAGCCAACATGGTGCTAAAACCTCATCAAATCCAACTTTCCTAGAAAAAATCAAACCAGAAA
TTACTCTCATCTCAGTTGGAAAAAACAATCGTGCGAAACTCCCCCATCAGGAATCCTTGACACGAATGGAAAGTATCAAG
AGTAAGATTTACAGAACTGACCAGCAAGGGGCTATCCGCTTTACAGGGTGGAATAGTTGGCGAATTGAAACGGTTCGATA
A


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7H9FC31

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEC/celB Streptococcus mitis SK321

87.534

100

0.875

  comEC/celB Streptococcus mitis NCTC 12261

87.651

99.866

0.875

  comEC/celB Streptococcus pneumoniae TIGR4

86.193

100

0.862

  comEC/celB Streptococcus pneumoniae Rx1

85.791

100

0.858

  comEC/celB Streptococcus pneumoniae D39

85.791

100

0.858

  comEC/celB Streptococcus pneumoniae R6

85.791

100

0.858

  comEC Lactococcus lactis subsp. cremoris KW2

45.209

99.33

0.449