Detailed information
Bioinformatically predicted
Overview
| Name | comE1/comEA | Type | Machinery gene |
| Locus tag | I6H44_RS05750 | Genome accession | NZ_CP065983 |
| Coordinates | 1174093..1174422 (-) | Length | 109 a.a. |
| NCBI ID | WP_006719264.1 | Uniprot ID | E6KZK4 |
| Organism | Aggregatibacter segnis strain FDAARGOS_987 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1169093..1179422
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6H44_RS05720 (I6H44_05720) | - | 1169124..1169765 (+) | 642 | WP_032997981.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| I6H44_RS05725 (I6H44_05725) | serA | 1169832..1171064 (-) | 1233 | WP_006719269.1 | phosphoglycerate dehydrogenase | - |
| I6H44_RS05730 (I6H44_05730) | rpiA | 1171083..1171739 (-) | 657 | WP_006719268.1 | ribose-5-phosphate isomerase RpiA | - |
| I6H44_RS05735 (I6H44_05735) | hemW | 1171840..1173009 (-) | 1170 | WP_006719267.1 | radical SAM family heme chaperone HemW | - |
| I6H44_RS05740 (I6H44_05740) | - | 1173009..1173332 (-) | 324 | WP_006719266.1 | YbjQ family protein | - |
| I6H44_RS05745 (I6H44_05745) | rdgB | 1173372..1173971 (-) | 600 | WP_006719265.1 | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase | - |
| I6H44_RS05750 (I6H44_05750) | comE1/comEA | 1174093..1174422 (-) | 330 | WP_006719264.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| I6H44_RS05755 (I6H44_05755) | glpE | 1174814..1175140 (+) | 327 | WP_006719262.1 | thiosulfate sulfurtransferase GlpE | - |
| I6H44_RS05760 (I6H44_05760) | - | 1175137..1175451 (-) | 315 | WP_006719261.1 | DUF5389 domain-containing protein | - |
| I6H44_RS05765 (I6H44_05765) | - | 1175493..1176368 (+) | 876 | WP_006719260.1 | rhomboid family intramembrane serine protease | - |
| I6H44_RS05770 (I6H44_05770) | - | 1176433..1177188 (+) | 756 | WP_006719259.1 | DeoR/GlpR family transcriptional regulator | - |
Sequence
Protein
Download Length: 109 a.a. Molecular weight: 11417.25 Da Isoelectric Point: 10.0532
>NTDB_id=515937 I6H44_RS05750 WP_006719264.1 1174093..1174422(-) (comE1/comEA) [Aggregatibacter segnis strain FDAARGOS_987]
MKVMKHLLASLFVLGTVFTGTAMAAEKAAEPAAQTEQPAATAAVSQKVNINTASAAEIQKALVGIGAKKAEAVVQYREKH
GAFSAVEQLLEVQGIGKATLEKNRDRIAL
MKVMKHLLASLFVLGTVFTGTAMAAEKAAEPAAQTEQPAATAAVSQKVNINTASAAEIQKALVGIGAKKAEAVVQYREKH
GAFSAVEQLLEVQGIGKATLEKNRDRIAL
Nucleotide
Download Length: 330 bp
>NTDB_id=515937 I6H44_RS05750 WP_006719264.1 1174093..1174422(-) (comE1/comEA) [Aggregatibacter segnis strain FDAARGOS_987]
ATGAAAGTAATGAAACATCTTTTGGCTTCTCTGTTCGTGTTAGGAACGGTGTTTACCGGCACTGCCATGGCAGCAGAAAA
GGCGGCAGAACCTGCAGCGCAAACAGAGCAACCTGCCGCAACGGCCGCTGTTAGCCAGAAAGTCAACATCAACACGGCCT
CTGCCGCCGAAATTCAAAAAGCGCTTGTGGGTATTGGCGCGAAAAAAGCGGAAGCCGTCGTGCAATACCGTGAAAAACAC
GGGGCGTTTAGTGCTGTCGAGCAATTATTAGAAGTGCAAGGTATCGGCAAAGCTACGCTCGAAAAAAATCGCGATCGCAT
CGCACTTTAA
ATGAAAGTAATGAAACATCTTTTGGCTTCTCTGTTCGTGTTAGGAACGGTGTTTACCGGCACTGCCATGGCAGCAGAAAA
GGCGGCAGAACCTGCAGCGCAAACAGAGCAACCTGCCGCAACGGCCGCTGTTAGCCAGAAAGTCAACATCAACACGGCCT
CTGCCGCCGAAATTCAAAAAGCGCTTGTGGGTATTGGCGCGAAAAAAGCGGAAGCCGTCGTGCAATACCGTGAAAAACAC
GGGGCGTTTAGTGCTGTCGAGCAATTATTAGAAGTGCAAGGTATCGGCAAAGCTACGCTCGAAAAAAATCGCGATCGCAT
CGCACTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE1/comEA | Haemophilus influenzae Rd KW20 |
60.909 |
100 |
0.615 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
53.982 |
100 |
0.56 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
42.453 |
97.248 |
0.413 |
| comEA | Vibrio cholerae C6706 |
41.509 |
97.248 |
0.404 |
| comEA | Vibrio cholerae strain A1552 |
41.509 |
97.248 |
0.404 |