Detailed information NTG0051458

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: SSUST1_RS00840
• Genome accession: NC_017950
• Coordinates: 133789..134223 (+)
• Length: 144 a.a.
• NCBI ID: WP_014735293.1
• Uniprot ID: -
• Organism: Streptococcus suis ST1
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 128789..139223

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SSUST1_RS00805 (SSUST1_0136)	-	129530..129895 (+)	366	WP_014735287.1	DUF1033 family protein	-
SSUST1_RS00810 (SSUST1_0137)	-	129930..130880 (-)	951	WP_014735288.1	S66 peptidase family protein	-
SSUST1_RS00815 (SSUST1_0138)	comGA	130966..131917 (+)	952	Protein_123	competence type IV pilus ATPase ComGA	-
SSUST1_RS00820 (SSUST1_0140)	comYB	131829..132866 (+)	1038	WP_268739958.1	competence type IV pilus assembly protein ComGB	Machinery gene
SSUST1_RS00825 (SSUST1_0141)	comYC	132868..133149 (+)	282	WP_014735290.1	competence type IV pilus major pilin ComGC	Machinery gene
SSUST1_RS00830 (SSUST1_0142)	comGD	133130..133537 (+)	408	WP_014735291.1	competence type IV pilus minor pilin ComGD	-
SSUST1_RS00835 (SSUST1_0143)	comYE	133509..133802 (+)	294	WP_024405248.1	competence type IV pilus minor pilin ComGE	Machinery gene
SSUST1_RS00840 (SSUST1_0144)	comGF/cglF	133789..134223 (+)	435	WP_014735293.1	competence type IV pilus minor pilin ComGF	Machinery gene
SSUST1_RS00845 (SSUST1_0145)	comGG	134201..134722 (+)	522	WP_014735294.1	competence type IV pilus minor pilin ComGG	-
SSUST1_RS00850 (SSUST1_0146)	comYH	134779..135732 (+)	954	WP_014735295.1	class I SAM-dependent methyltransferase	Machinery gene
SSUST1_RS00855 (SSUST1_0147)	-	135782..136969 (+)	1188	WP_012775422.1	acetate kinase	-
SSUST1_RS00860 (SSUST1_0148)	-	137284..137835 (+)	552	WP_012774908.1	folate family ECF transporter S component	-
SSUST1_RS00865 (SSUST1_0149)	-	137891..139147 (+)	1257	WP_011921729.1	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16447.80 Da
• Isoelectric Point: 7.9752

>NTDB_id=51458 SSUST1_RS00840 WP_014735293.1 133789..134223(+) (comGF/cglF) [Streptococcus suis ST1]
MLKSKIPAFTLLECLVALVILSGSLLVFEGLSKLLVQEAHYQGQTVQKEWLVFSSQLRSEWDQAELVKVENGKVYVNKGE
QALAFGKSRSDDFRKTNDRGQGYQPMLYQVDSAAISRENQLVRIDFSFKNGEERTFIYAFKEKS

Nucleotide

• Length: 435 bp

>NTDB_id=51458 SSUST1_RS00840 WP_014735293.1 133789..134223(+) (comGF/cglF) [Streptococcus suis ST1]
TTGTTAAAAAGTAAAATTCCTGCTTTTACTCTCTTGGAATGCTTGGTAGCCTTAGTCATCCTTTCAGGTAGTCTTCTGGT
CTTTGAAGGCTTGTCAAAACTGCTGGTCCAAGAAGCGCATTACCAAGGTCAGACCGTTCAAAAGGAATGGTTGGTCTTCT
CTAGTCAATTGCGGTCGGAGTGGGACCAGGCTGAATTGGTCAAGGTTGAAAATGGCAAGGTCTATGTCAACAAAGGCGAA
CAGGCTTTGGCCTTTGGCAAGTCACGGTCGGATGATTTTCGGAAAACAAATGACAGGGGACAGGGTTACCAGCCCATGCT
CTATCAGGTGGATAGCGCAGCCATTTCCCGAGAAAACCAGCTGGTGCGCATCGACTTTAGCTTTAAAAACGGAGAGGAGC
GAACCTTTATCTATGCTTTTAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (37-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae TIGR4	53.191	97.917	0.521
comGF/cglF	Streptococcus pneumoniae Rx1	53.191	97.917	0.521
comGF/cglF	Streptococcus pneumoniae D39	53.191	97.917	0.521
comGF/cglF	Streptococcus pneumoniae R6	53.191	97.917	0.521
comGF/cglF	Streptococcus mitis NCTC 12261	53.731	93.056	0.5
comYF	Streptococcus mutans UA140	49.306	100	0.493
comYF	Streptococcus mutans UA159	48.611	100	0.486
comGF/cglF	Streptococcus mitis SK321	50.746	93.056	0.472
comGF	Lactococcus lactis subsp. cremoris KW2	46.809	97.917	0.458