Detailed information NTG0513946

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: I6G32_RS14270
• Genome accession: NZ_CP065750
• Coordinates: 3113331..3114395 (+)
• Length: 354 a.a.
• NCBI ID: WP_013981650.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain FDAARGOS_875
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3108331..3119395

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6G32_RS14255 (I6G32_14255)	-	3108457..3109251 (+)	795	WP_013981648.1	thermonuclease family protein	-
I6G32_RS14260 (I6G32_14260)	-	3109393..3110661 (+)	1269	WP_011911783.1	malic enzyme-like NAD(P)-binding protein	-
I6G32_RS14265 (I6G32_14265)	-	3110728..3113151 (-)	2424	WP_013981649.1	penicillin-binding protein 1A	-
I6G32_RS14270 (I6G32_14270)	comM	3113331..3114395 (+)	1065	WP_013981650.1	pilus assembly protein PilM	Machinery gene
I6G32_RS14275 (I6G32_14275)	pilN	3114395..3114967 (+)	573	WP_013981651.1	type 4a pilus biogenesis protein PilN	-
I6G32_RS14280 (I6G32_14280)	pilO	3114964..3115590 (+)	627	WP_017244292.1	type 4a pilus biogenesis protein PilO	-
I6G32_RS14285 (I6G32_14285)	pilP	3115587..3116114 (+)	528	WP_013981653.1	type 4a pilus biogenesis lipoprotein PilP	-
I6G32_RS14290 (I6G32_14290)	pilQ	3116168..3118288 (+)	2121	WP_013981654.1	type IV pilus secretin PilQ	Machinery gene
I6G32_RS14295 (I6G32_14295)	aroK	3118292..3118837 (+)	546	WP_080564967.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37744.28 Da
• Isoelectric Point: 4.6880

>NTDB_id=513946 I6G32_RS14270 WP_013981650.1 3113331..3114395(+) (comM) [Stutzerimonas stutzeri strain FDAARGOS_875]
MLGLFTKKANTLLGIDISSTSVKLLELSRSGNRYRVEAYAVEPLPPNAVVEKNIAELEGVGQALQRVVAKAKTGCKSAVV
AVSGSAVITKMIEMDAGLSDEELENQLKIEADQYIPYPLEEVAIDFEVQGPAPRAPGRVEVLLAACRKENVEIREAALAL
AGLTAKVVDVEAYALERSYGLLASQLGTAHGELTVAVVDIGATMTTLSVLHNGRTIYTREQLFGGRQLTEEIQRRYGLSQ
EEAGLAKKQGGLPDDYDSEVLLPFKEAVVQQVSRSLQFFFAAGQFHDVDCILLAGGTASIPGLDHMIQQKIGTQTLVANP
FADMALSGKVNAGALASDAPALMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=513946 I6G32_RS14270 WP_013981650.1 3113331..3114395(+) (comM) [Stutzerimonas stutzeri strain FDAARGOS_875]
GTGCTAGGGCTCTTCACTAAGAAAGCGAACACGCTGCTTGGGATCGATATCAGTTCGACCTCAGTCAAGCTCCTCGAATT
AAGTCGATCGGGTAATCGGTACCGCGTCGAGGCTTATGCCGTCGAGCCGCTACCACCGAATGCCGTCGTCGAAAAGAATA
TCGCCGAACTTGAGGGTGTCGGTCAGGCCCTGCAGCGAGTCGTTGCCAAGGCCAAGACCGGCTGCAAGTCCGCTGTTGTC
GCTGTCTCCGGGTCTGCCGTCATCACAAAGATGATTGAAATGGATGCCGGGCTTTCTGATGAAGAGCTCGAGAACCAGCT
CAAGATCGAGGCGGATCAGTACATCCCCTACCCACTGGAGGAAGTCGCGATCGACTTCGAGGTGCAAGGTCCTGCGCCTC
GCGCGCCTGGCAGGGTAGAAGTTCTCCTCGCCGCTTGCCGTAAAGAGAATGTCGAGATCCGTGAAGCCGCGCTGGCCTTG
GCCGGGCTTACCGCCAAAGTGGTGGATGTCGAGGCCTATGCGCTTGAGCGCTCCTATGGGTTGCTCGCTTCACAGCTGGG
TACAGCGCACGGCGAGCTGACCGTTGCCGTCGTCGATATCGGCGCGACCATGACAACCCTGAGCGTGCTGCATAACGGGC
GTACCATCTACACGCGCGAGCAGCTGTTCGGTGGTCGCCAACTGACCGAAGAGATCCAGCGCCGCTACGGTCTGTCTCAG
GAAGAAGCCGGCCTTGCCAAGAAGCAAGGCGGTCTCCCAGATGACTACGACAGTGAAGTCCTGCTTCCGTTCAAGGAGGC
GGTGGTGCAGCAGGTATCCCGCTCGTTGCAGTTCTTCTTCGCTGCAGGGCAGTTCCACGACGTCGACTGCATCCTGCTCG
CGGGCGGGACGGCCTCCATTCCAGGTCTCGATCACATGATTCAGCAAAAGATCGGAACGCAAACTCTAGTGGCTAATCCT
TTCGCCGATATGGCTTTGAGCGGCAAGGTGAACGCCGGGGCGCTGGCCAGCGATGCGCCTGCATTAATGATTGCATGCGG
TTTGGCGCTGAGGAGCTTTGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	55.932	100	0.559
pilM	Acinetobacter baumannii D1279779	55.932	100	0.559
comM	Acinetobacter baylyi ADP1	53.39	100	0.534
pilM	Legionella pneumophila strain ERS1305867	46.328	100	0.463