Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | I6G22_RS07160 | Genome accession | NZ_CP065737 |
| Coordinates | 1352576..1352872 (+) | Length | 98 a.a. |
| NCBI ID | WP_010906316.1 | Uniprot ID | A0A3N6L9Y1 |
| Organism | Lactococcus lactis strain FDAARGOS_865 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1347576..1357872
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6G22_RS07140 (I6G22_07145) | comGA | 1349911..1350849 (+) | 939 | WP_031561106.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| I6G22_RS07145 (I6G22_07150) | comGB | 1350743..1351816 (+) | 1074 | WP_074453836.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| I6G22_RS07150 (I6G22_07155) | comGC | 1351944..1352213 (+) | 270 | WP_023188581.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| I6G22_RS07155 (I6G22_07160) | comGD | 1352188..1352604 (+) | 417 | WP_025017137.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| I6G22_RS07160 (I6G22_07165) | comGE | 1352576..1352872 (+) | 297 | WP_010906316.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| I6G22_RS07165 (I6G22_07170) | comGF | 1352835..1353281 (+) | 447 | WP_032943612.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| I6G22_RS07170 (I6G22_07175) | comGG | 1353320..1353604 (+) | 285 | WP_025017139.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| I6G22_RS07175 (I6G22_07180) | - | 1353694..1354131 (+) | 438 | WP_003129992.1 | zinc-dependent MarR family transcriptional regulator | - |
| I6G22_RS07180 (I6G22_07185) | - | 1354128..1354970 (+) | 843 | WP_015427160.1 | metal ABC transporter substrate-binding protein | - |
| I6G22_RS07185 (I6G22_07190) | - | 1355147..1355884 (+) | 738 | WP_012898617.1 | metal ABC transporter ATP-binding protein | - |
| I6G22_RS07190 (I6G22_07195) | - | 1355877..1356686 (+) | 810 | WP_014570791.1 | metal ABC transporter permease | - |
| I6G22_RS07195 (I6G22_07200) | - | 1356724..1357590 (-) | 867 | WP_025017140.1 | RluA family pseudouridine synthase | - |
Sequence
Protein
Download Length: 98 a.a. Molecular weight: 11076.95 Da Isoelectric Point: 6.4684
>NTDB_id=513734 I6G22_RS07160 WP_010906316.1 1352576..1352872(+) (comGE) [Lactococcus lactis strain FDAARGOS_865]
MENLKRKSVKAYLLLESLISIALLAFLVSFIVSSLVQVRQKDTEENQKIEALNVAQMAIESHLTELSINGSDIKIKENQN
LLIISNHGKEIMRLELQS
MENLKRKSVKAYLLLESLISIALLAFLVSFIVSSLVQVRQKDTEENQKIEALNVAQMAIESHLTELSINGSDIKIKENQN
LLIISNHGKEIMRLELQS
Nucleotide
Download Length: 297 bp
>NTDB_id=513734 I6G22_RS07160 WP_010906316.1 1352576..1352872(+) (comGE) [Lactococcus lactis strain FDAARGOS_865]
GTGGAAAATTTAAAAAGAAAATCAGTTAAGGCATATTTGCTTTTGGAAAGTTTAATTAGTATAGCTCTACTCGCTTTTCT
AGTCAGCTTTATCGTAAGTTCTCTTGTGCAAGTAAGACAAAAAGATACGGAAGAAAATCAAAAGATTGAAGCTTTAAACG
TGGCACAAATGGCGATTGAAAGTCACTTAACAGAATTATCAATCAACGGTTCTGATATAAAGATAAAAGAAAACCAAAAT
TTACTGATTATTAGTAATCATGGAAAGGAAATTATGCGACTTGAACTTCAAAGTTAA
GTGGAAAATTTAAAAAGAAAATCAGTTAAGGCATATTTGCTTTTGGAAAGTTTAATTAGTATAGCTCTACTCGCTTTTCT
AGTCAGCTTTATCGTAAGTTCTCTTGTGCAAGTAAGACAAAAAGATACGGAAGAAAATCAAAAGATTGAAGCTTTAAACG
TGGCACAAATGGCGATTGAAAGTCACTTAACAGAATTATCAATCAACGGTTCTGATATAAAGATAAAAGAAAACCAAAAT
TTACTGATTATTAGTAATCATGGAAAGGAAATTATGCGACTTGAACTTCAAAGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Lactococcus lactis subsp. cremoris KW2 |
68.041 |
98.98 |
0.673 |